Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.009G153900.1 |
Family | GH3 |
Protein Properties | Length: 630 Molecular Weight: 68562.3 Isoelectric Point: 9.1289 |
Chromosome | Chromosome/Scaffold: 09 Start: 12025721 End: 12030673 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 106 | 341 | 0 |
STRLGIPMIYGIDAVHGHSNVYNATIFPHNVGLGVTRDPQLVKKIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHRIVQLMTEIIPGLQG ELPANSKKGVPFVAPGNTKVAACAKHFVGDGGTTKGIDENNTVISMNGLLNIHMPAYYNAISKGVATVMVSYSSWNGKRMHINRDLVTGFLKNKMKFRGF VISDWQGIDRVTSPPHANYSSSVHAGVDAGIDMIMV |
Full Sequence |
---|
Protein Sequence Length: 630 Download |
MGRLSRPILG FLLLCCLIVA GEAEYLKYKD PKMPIGARIK DLMKRMTLEE KIGQMVQIER 60 TVATPDVMKQ YFIGSVLSGG GSVPGPKASA EAWVNLVNGI QKASLSTRLG IPMIYGIDAV 120 HGHSNVYNAT IFPHNVGLGV TRDPQLVKKI GEATALEVRA TGIPYAFAPC IAVCRDPRWG 180 RCYESYSEDH RIVQLMTEII PGLQGELPAN SKKGVPFVAP GNTKVAACAK HFVGDGGTTK 240 GIDENNTVIS MNGLLNIHMP AYYNAISKGV ATVMVSYSSW NGKRMHINRD LVTGFLKNKM 300 KFRGFVISDW QGIDRVTSPP HANYSSSVHA GVDAGIDMIM VPFNFTEFID DLTYQVKNNI 360 IPMSRINDAV QRILRVKFVM GLFEKPLADL SMANQLGSQE HRELAREAVR KSLVLLKNGK 420 YSTAKPFLPL PKKAPKILIA GSHADNLGYQ CGGWTITWQG LGGNDLTTGT TILNAVKNTV 480 DPTTQVVYNE NPDSNFVKSN KFSYAIVVVG EPPYAEMYGD SSNLTISEPG PSTINNVCGA 540 VKCVVIVISG RPVVIQPYLE KIDALVAAWL PGTEGQGVVD NLFGDYGFTG KLARTWFKTV 600 DQLPMNVGDP HYDPLFPFGF GITTKPAKN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 4.0e-12 | 479 | 623 | 177 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-35 | 413 | 623 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-54 | 37 | 418 | 393 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 7.0e-79 | 46 | 418 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-90 | 47 | 376 | 334 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 626 | 1 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 1 | 627 | 1 | 626 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002278363.1 | 0 | 1 | 629 | 1 | 627 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 1 | 629 | 1 | 627 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 1 | 629 | 1 | 632 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 24 | 628 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iex_A | 0 | 24 | 628 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iew_A | 0 | 24 | 628 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iev_A | 0 | 24 | 628 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1ieq_A | 0 | 24 | 628 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |