| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G153900.4 |
| Family | GH3 |
| Protein Properties | Length: 435 Molecular Weight: 47206.2 Isoelectric Point: 8.9599 |
| Chromosome | Chromosome/Scaffold: 09 Start: 12027240 End: 12030670 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 2 | 146 | 2.7e-39 |
| TEIIPGLQGELPANSKKGVPFVAPGNTKVAACAKHFVGDGGTTKGIDENNTVISMNGLLNIHMPAYYNAISKGVATVMVSYSSWNGKRMHINRDLVTGFL KNKMKFRGFVISDWQGIDRVTSPPHANYSSSVHAGVDAGIDMIMV | |||
| Full Sequence |
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| Protein Sequence Length: 435 Download |
| MTEIIPGLQG ELPANSKKGV PFVAPGNTKV AACAKHFVGD GGTTKGIDEN NTVISMNGLL 60 NIHMPAYYNA ISKGVATVMV SYSSWNGKRM HINRDLVTGF LKNKMKFRGF VISDWQGIDR 120 VTSPPHANYS SSVHAGVDAG IDMIMVPFNF TEFIDDLTYQ VKNNIIPMSR INDAVQRILR 180 VKFVMGLFEK PLADLSMANQ LGSQEHRELA REAVRKSLVL LKNGKYSTAK PFLPLPKKAP 240 KILIAGSHAD NLGYQCGGWT ITWQGLGGND LTTGTTILNA VKNTVDPTTQ VVYNENPDSN 300 FVKSNKFSYA IVVVGEPPYA EMYGDSSNLT ISEPGPSTIN NVCGAVKCVV IVISGRPVVI 360 QPYLEKIDAL VAAWLPGTEG QGVVDNLFGD YGFTGKLART WFKTVDQLPM NVGDPHYDPL 420 FPFGFGITTK PAKN* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK15098 | PRK15098 | 2.0e-12 | 284 | 428 | 177 | + beta-D-glucoside glucohydrolase; Provisional |
| PRK15098 | PRK15098 | 6.0e-26 | 7 | 223 | 226 | + beta-D-glucoside glucohydrolase; Provisional |
| pfam01915 | Glyco_hydro_3_C | 5.0e-35 | 218 | 428 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| COG1472 | BglX | 4.0e-42 | 29 | 223 | 198 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam00933 | Glyco_hydro_3 | 5.0e-44 | 3 | 181 | 180 | + Glycosyl hydrolase family 3 N terminal domain. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ17461.1 | 0 | 1 | 431 | 196 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
| RefSeq | XP_002278363.1 | 0 | 1 | 434 | 196 | 627 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002278377.1 | 0 | 1 | 434 | 196 | 628 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002313632.1 | 0 | 1 | 434 | 194 | 627 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523935.1 | 0 | 1 | 434 | 200 | 632 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 1 | 434 | 173 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 1 | 434 | 173 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iew_A | 0 | 1 | 434 | 173 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iev_A | 0 | 1 | 434 | 173 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1ieq_A | 0 | 1 | 434 | 173 | 604 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DW479507 | 297 | 135 | 431 | 0 |
| DW500162 | 319 | 103 | 421 | 0 |
| DY668382 | 309 | 1 | 309 | 0 |
| HO784016 | 308 | 1 | 308 | 0 |
| FE682210 | 291 | 101 | 391 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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