| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G154800.1 |
| Family | GH3 |
| Protein Properties | Length: 334 Molecular Weight: 36723 Isoelectric Point: 6.4325 |
| Chromosome | Chromosome/Scaffold: 09 Start: 12075170 End: 12080384 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 54 | 207 | 1.6e-35 |
| SSRLGIPMIYGIDVVHGHKNIYKATIFPHNVGPGATRDPDRIGAATALEVRATGIPYVCRDPRWGRCYESYSEDPKVVEMMTEIIPGLQGDVPPDSRKGV PYVGGKDKVPACAKHFVGDEGTTKGINENNIVIGYHGLMSIHMPSYFHSIIKGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 334 Download |
| MLLQKIERSV ATADVLKDYS IGSIISGGGS APHFNAKAQD WIHMINGFQN VSLSSRLGIP 60 MIYGIDVVHG HKNIYKATIF PHNVGPGATR DPDRIGAATA LEVRATGIPY VCRDPRWGRC 120 YESYSEDPKV VEMMTEIIPG LQGDVPPDSR KGVPYVGGKD KVPACAKHFV GDEGTTKGIN 180 ENNIVIGYHG LMSIHMPSYF HSIIKGVSTG FVIFDWKGID MITYPPHSNY TESVLKGISA 240 GIDMIMVPYN HTEFINIVID LVNNNYISTD RIDDVVKRIL RVKFTLGLFE TPLAEETLVD 300 QLGSQRFGKG SCEEVTCVVE EWRECRCSSS TPP* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN03080 | PLN03080 | 3.0e-7 | 56 | 170 | 143 | + Probable beta-xylosidase; Provisional |
| PRK15098 | PRK15098 | 4.0e-25 | 55 | 292 | 287 | + beta-D-glucoside glucohydrolase; Provisional |
| COG1472 | BglX | 2.0e-37 | 55 | 292 | 286 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| pfam00933 | Glyco_hydro_3 | 5.0e-49 | 39 | 282 | 289 | + Glycosyl hydrolase family 3 N terminal domain. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002271545.1 | 0 | 3 | 305 | 54 | 397 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319151.1 | 0 | 3 | 315 | 30 | 383 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514453.1 | 0 | 3 | 306 | 53 | 397 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002523937.1 | 0 | 3 | 305 | 55 | 395 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002525724.1 | 0 | 3 | 315 | 53 | 406 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 3 | 306 | 32 | 376 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1x38_A | 0 | 3 | 306 | 32 | 376 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1lq2_A | 0 | 3 | 306 | 32 | 376 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 3 | 306 | 32 | 376 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 3 | 306 | 32 | 376 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FN998758 | 315 | 32 | 305 | 0 |
| FN998735 | 304 | 32 | 294 | 0 |
| FN998511 | 304 | 32 | 294 | 0 |
| FN998446 | 308 | 32 | 298 | 0 |
| HO784016 | 325 | 32 | 315 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
