Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G156800.1 |
Family | AA1 |
Protein Properties | Length: 577 Molecular Weight: 63481.7 Isoelectric Point: 9.5793 |
Chromosome | Chromosome/Scaffold: 09 Start: 12187414 End: 12190445 |
Description | laccase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 38 | 562 | 0 |
TRHYKFNIKLTNVTRLCHTKSMVTVNGKFPGPRVVAREGDRLVVKVVNHVPNNISIHWHGIRQLQSGWADGPAYITQCPIQTNQTYVYNFTITGQRGTLF WHAHLSWLRASVYGPLIILPKRNVSYPFAKPHKEVTIMLGEWFNADTEAVISQALQTGGGPNVSEAYTFNGLPGPLYNCSENNTYKLKVKPGKTYLLRLI NAALNDDLFFSIANHTFTVVEVDATYAKPFETNLLVITAGQTTNVLLKAKPIAPNASFYMLARPYFTGQGTFDNTTVAGILEYETSSNSTAFKPTLPPIN ATNVVANFTRRLRSLANSRFPVNVPQTVDKKFFFTVGLGNSPCPKNQTCQGPNGTKFSASVNNISMALPSSALLQSYFFKKSNGVYTSDFPSFPLHPFNY TGTPPNNTLVANGTKLVVVPFNTSVEVVMQGTRIFGAESHPLHLHGFNFYVVGEGFGNFDPNNDPKNFNLVDPVERNTVGVPTAGWVAIRFHADNPGVWF MHCHFDVHLSWGLRMAWIVLDGTLP |
Full Sequence |
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Protein Sequence Length: 577 Download |
MGASVPASPE ILLTILLFAM SCLWAFPEVA GAKHAGITRH YKFNIKLTNV TRLCHTKSMV 60 TVNGKFPGPR VVAREGDRLV VKVVNHVPNN ISIHWHGIRQ LQSGWADGPA YITQCPIQTN 120 QTYVYNFTIT GQRGTLFWHA HLSWLRASVY GPLIILPKRN VSYPFAKPHK EVTIMLGEWF 180 NADTEAVISQ ALQTGGGPNV SEAYTFNGLP GPLYNCSENN TYKLKVKPGK TYLLRLINAA 240 LNDDLFFSIA NHTFTVVEVD ATYAKPFETN LLVITAGQTT NVLLKAKPIA PNASFYMLAR 300 PYFTGQGTFD NTTVAGILEY ETSSNSTAFK PTLPPINATN VVANFTRRLR SLANSRFPVN 360 VPQTVDKKFF FTVGLGNSPC PKNQTCQGPN GTKFSASVNN ISMALPSSAL LQSYFFKKSN 420 GVYTSDFPSF PLHPFNYTGT PPNNTLVANG TKLVVVPFNT SVEVVMQGTR IFGAESHPLH 480 LHGFNFYVVG EGFGNFDPNN DPKNFNLVDP VERNTVGVPT AGWVAIRFHA DNPGVWFMHC 540 HFDVHLSWGL RMAWIVLDGT LPSQKLPPPP SDLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-51 | 44 | 158 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-65 | 19 | 550 | 566 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-73 | 12 | 563 | 593 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-84 | 38 | 568 | 571 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 36 | 576 | 543 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16224.1 | 0 | 1 | 576 | 1 | 585 | unnamed protein product [Vitis vinifera] |
EMBL | CBI31651.1 | 0 | 1 | 576 | 511 | 1094 | unnamed protein product [Vitis vinifera] |
EMBL | CBI31651.1 | 0 | 12 | 507 | 1 | 504 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284473.1 | 0 | 1 | 576 | 1 | 585 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313424.1 | 0 | 1 | 576 | 1 | 576 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 39 | 566 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asq_A | 0 | 39 | 566 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_B | 0 | 39 | 566 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1asp_A | 0 | 39 | 566 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1aso_B | 0 | 39 | 566 | 4 | 536 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |