| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.009G163700.2 |
| Family | GH17 |
| Protein Properties | Length: 380 Molecular Weight: 41786.7 Isoelectric Point: 6.1139 |
| Chromosome | Chromosome/Scaffold: 09 Start: 12528450 End: 12532710 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 28 | 343 | 0 |
| GINYGQIADNLPSPSRVSVMLQSLDVSRLKLYDTDPKVLQAFSNSSVEFIVGIGNEYLQDMADPVKAQNWVQQHLQPYLAQTKITCISVGNEVFMSNDTQ IWSNLLPAMKMVHNTLVNLGLDKQVIVTTAHPFTIIGNSYPPSSGTFRQDIIGYMHAILDFHSQTKSPFLINAYPFFAYKDSPGQISLDYVLFQPNEGMT DPNTNLHYDNMLYAQVDAVYSAIKAIGHTDVEVKISETGWPSKGDPTEVGSTLQNAELYHSNLLKRIQQKQGTPAKPSVPIDVYVFALFNENLKPGPTSE RNYGLFYPDGTPVFNI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 380 Download |
| MATYSVHLRL LFLLLALSGV HVLGAGFGIN YGQIADNLPS PSRVSVMLQS LDVSRLKLYD 60 TDPKVLQAFS NSSVEFIVGI GNEYLQDMAD PVKAQNWVQQ HLQPYLAQTK ITCISVGNEV 120 FMSNDTQIWS NLLPAMKMVH NTLVNLGLDK QVIVTTAHPF TIIGNSYPPS SGTFRQDIIG 180 YMHAILDFHS QTKSPFLINA YPFFAYKDSP GQISLDYVLF QPNEGMTDPN TNLHYDNMLY 240 AQVDAVYSAI KAIGHTDVEV KISETGWPSK GDPTEVGSTL QNAELYHSNL LKRIQQKQGT 300 PAKPSVPIDV YVFALFNENL KPGPTSERNY GLFYPDGTPV FNIGLQGNLP GIMYSSASNI 360 NALSTFSLVI SVLAYLIHA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 5.0e-5 | 28 | 336 | 321 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 2.0e-95 | 28 | 343 | 317 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94377.1 | 0 | 1 | 379 | 1 | 379 | unknown [Populus trichocarpa] |
| GenBank | ACU21124.1 | 0 | 20 | 369 | 30 | 377 | unknown [Glycine max] |
| RefSeq | XP_002312820.1 | 0 | 1 | 367 | 1 | 367 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002328249.1 | 0 | 19 | 361 | 21 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523810.1 | 0 | 20 | 361 | 6 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 28 | 343 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_C | 0 | 28 | 343 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_B | 0 | 28 | 343 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_A | 0 | 28 | 343 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3em5_D | 0 | 28 | 343 | 3 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
