CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.009G168000.4
FamilyGT13
Protein PropertiesLength: 423 Molecular Weight: 49449.5 Isoelectric Point: 8.8819
ChromosomeChromosome/Scaffold: 09 Start: 12774544 End: 12779205
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT1314110
  MRLFVTQSKYEDRLAAAIESENHCTSQSRLLIDQISIQQGTIVSLQEQNKRQSEECRQLKALLEDLERKGLKKLVDKVPVAAVVIMACNRADYLERTIES
  VLKYQSSVASKYPLFVSQDGTDPNVRSKAMSYDQLMYIQHLDSEPVHTERPGELIAYYKIARHYKWAMDQLFYKHNFSRVIILEDDMEIAPDFFDYFEAA
  AALLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLTKSIWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSMGQFFQQ
  YLQPIKLNDVKVDWKSRDLSYLMKDKYTKHFADIVRKAKPIQGTDAVLKASNIEGDVRIQYKDQPDFERIARQLGIFQEWKDGIPRTSFKGVVVFRYRTT
  RRVFLVGPDSL
Full Sequence
Protein Sequence     Length: 423     Download
MRLFVTQSKY EDRLAAAIES ENHCTSQSRL LIDQISIQQG TIVSLQEQNK RQSEECRQLK    60
ALLEDLERKG LKKLVDKVPV AAVVIMACNR ADYLERTIES VLKYQSSVAS KYPLFVSQDG    120
TDPNVRSKAM SYDQLMYIQH LDSEPVHTER PGELIAYYKI ARHYKWAMDQ LFYKHNFSRV    180
IILEDDMEIA PDFFDYFEAA AALLDKDKSI MAVSSWNDNG QKQFVHDPYE LYRSDFFPGL    240
GWMLTKSIWD ELSPKWPKAY WDDWLRLKEN HKGRQFIRPE VCRTYNFGEH GSSMGQFFQQ    300
YLQPIKLNDV KVDWKSRDLS YLMKDKYTKH FADIVRKAKP IQGTDAVLKA SNIEGDVRIQ    360
YKDQPDFERI ARQLGIFQEW KDGIPRTSFK GVVVFRYRTT RRVFLVGPDS LRQLGIKDAR    420
NI* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13641Glyco_tranf_2_30.000982208130+
cd00761Glyco_tranf_GTA_type0.000283278199+
cd02514GT13_GLCNAC-TI3.0e-16680391317+
pfam03071GNT-I01418426+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAC80697.10141926446N-acetylglucosaminyltransferase I [Solanum tuberosum]
EMBLCAC80702.10141926446N-acetylglucosaminyltransferase I [Nicotiana tabacum]
EMBLCBI29533.10141624438unnamed protein product [Vitis vinifera]
RefSeqNP_195537.20141924444CGL1 (COMPLEX GLYCAN LESS 1); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase/ protein N-acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana]
RefSeqXP_002313578.10142224444predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1foa_A0754103339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo9_A0754103339A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo8_A0804103334A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2apc_A0804102333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
PDB2am5_A0804102333A Chain A, Crystal Structure Of N-Acetylglucosaminyltransferase I
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8416562861033880
EH7311532911274170
GO80252732363250
DT50109324112410
GO80271431563170
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.004G206900.3Potri.004G206900.1Potri.004G206900.2
Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny