| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.010G044100.1 |
| Family | CBM45 |
| Protein Properties | Length: 1477 Molecular Weight: 165906 Isoelectric Point: 6.09 |
| Chromosome | Chromosome/Scaffold: 10 Start: 7478789 End: 7494143 |
| Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM45 | 131 | 206 | 5.6e-24 |
| LHWGVVRDRKEKWVLPSLQPDGTKNYKNRALRSPFMESGSNSYINIAIDDPAIQAIEFLIVDEAQNKWFKNNGQNF | |||
| Full Sequence |
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| Protein Sequence Length: 1477 Download |
| MSNHSSIIGH YKVFNNQSLL RPTASEHRSS KLNSTGIPAN SLFQSARRPL SSFYGNSLRV 60 RKSKLGIAGA RRSFIFTPRA VLAMDPPSEQ LAGRFNLDGN IEMQVFVSHS SGSSIAQVNI 120 QINYSSDSLL LHWGVVRDRK EKWVLPSLQP DGTKNYKNRA LRSPFMESGS NSYINIAIDD 180 PAIQAIEFLI VDEAQNKWFK NNGQNFYVEL PTREKLTIPN VSVPEELVQI QSYLRWERNG 240 KQMYTPEQEK EEYEAARFEL MEKVARGTSI EDLRATLTNK NDIREIKEPS VSQIENNLPD 300 DLVQLQAYMR WEKAGKPNFS PEQQQSEFEK AREELQAELG KGVSVDEIRK KISKGEIKTN 360 VSKQLQNKRY FSTERIQRKG RDLAQLINRH SAKSVEDRAS KSVEEKASIE PKVLKAVELF 420 AKEKEEHDGG AVLNKKIFKL ADKELLVLVT KPGGKLKVRL ATDFEEPVTL HWALSKKAGE 480 WMEPPPTVLP PGSVALKEAA ETQLKNESSA KFSYQVQSFE IEIEEDIFVG LPFVLLSNGR 540 WIKNNGSDFY IEFSRGSKHV QKDAGDGIGT ARALLDKIAE LESEAQKSFM HRFNIAADLM 600 DKAKDAGELG LAGILVWMRF MATRQLIWNK NYNVKPREIS KAQDRLTDLL QDIYASNPQH 660 QELLRMIMST VGRGGEGDVG QRIRDEILVI QRNNECKGGM MEEWHQKLHN NTSPDDVIIC 720 QALIDHIKSD FDISVYWKTL NENGITKERL LSYDRAIHSE PNFRRDQKDG LLRDLGNYMR 780 TLKAVHSGAD LESAITNCMG YRSEGQGFMV GVQINPIPGL PSGFPELLQF VLKHVEDKNV 840 EALIEGLLEA RQELRPLLFK SNNRLKDLLF LDIALDSTVR TAIERGYEEL SNAGPEKIMY 900 FITLVLENLA LSSDDNEDLI YCVKEWKHAL SMSNSKSDHW ALYSKSVLDR TRLALASKAE 960 WYHQVLQPSA EYLGSLLGVD QWAVNIFTEE IIRAGSAAAL SVLLNRLDPV LRQTAHLGSW 1020 QVISPVEAVG YVVAVDELLT VQNKTYNLPT ILVAKRVKGE EEIPDGAVAL LTPDMPDVLS 1080 HVSVRARNSK VCFATCFDPD ILANLQAYEG KLLRLKPTSA DIVYSELTEG ELADSSSTNL 1140 TEGSPSPIKL VRKEFSGRYA ISSEEFTSEM VGAKSRNISY LKGKVPSWIG IPTSVALPFG 1200 VFEKVLSEDS NQEVANKLQL LKKNLGEELS ALREIRQTVL QLTAPPQLVQ ELKTKMQSSE 1260 MPWPGDEGEQ RWDQAWMAIK KVWASKWNER AYFSARKVKL DHDYLCMAVL VQEVINADYA 1320 FVIHTTNPSS GDSSEIYAEV VKGLGETLVG AYPGRALSFI CKKNDLNSPQ VLGYPSKPIG 1380 LFIRRSIIFR SDSNGEDLEG YAGAGLYDSV PMDEEEKVVL DYSSDPLITD EQFRRRILSG 1440 IARAGSAIEE LYGSPQDIEG VIRDGNVYVV QTRPQV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02784 | PLN02784 | 1.0e-9 | 453 | 599 | 149 | + alpha-amylase | ||
| COG0574 | PpsA | 7.0e-12 | 1271 | 1474 | 207 | + Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] | ||
| PRK06464 | PRK06464 | 3.0e-15 | 1278 | 1474 | 210 | + phosphoenolpyruvate synthase; Validated | ||
| TIGR01418 | PEP_synth | 9.0e-16 | 1169 | 1475 | 347 | + phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes [Energy metabolism, Glycolysis/gluconeogenesis]. | ||
| pfam01326 | PPDK_N | 2.0e-34 | 1167 | 1475 | 337 | + Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005524 | ATP binding |
| GO:0016301 | kinase activity |
| GO:0016310 | phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG69788.1 | 0 | 17 | 1476 | 12 | 1465 | glucan water dikinase [Solanum lycopersicum] |
| Swiss-Prot | Q8LPT9 | 0 | 16 | 1476 | 11 | 1475 | GWD1_CITRE RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor |
| RefSeq | XP_002270485.1 | 0 | 5 | 1476 | 2 | 1470 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315679.1 | 0 | 1 | 1476 | 1 | 1477 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527902.1 | 0 | 53 | 1476 | 57 | 1469 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2ols_A | 0.002 | 1233 | 1475 | 85 | 336 | A Chain A, The Crystal Structure Of The Phosphoenolpyruvate Synthase From Neisseria Meningitidis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO777523 | 898 | 582 | 1477 | 0 |
| HO794398 | 752 | 728 | 1477 | 0 |
| HO794398 | 142 | 587 | 728 | 0 |
| HO644248 | 451 | 1030 | 1477 | 0 |
| DY667394 | 305 | 653 | 957 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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