Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G088500.1 |
Family | GH17 |
Protein Properties | Length: 345 Molecular Weight: 38370.9 Isoelectric Point: 5.0316 |
Chromosome | Chromosome/Scaffold: 10 Start: 11240408 End: 11242227 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 342 | 0 |
GIIYGRNGDNLPSPKRVIDFLTEDMNHAISLVRVYDANTEVLEALSGTNLVVTIGVPDEAIAHVASSQEAADKWFRDHVLTYVHKGVRFRYICVGNEAIP GVVQSLVPQAIINLYNSVRKASVDYIYVTTAVGGKVLESSYPPSAGRFANGVDKIMNNLTNYLYNIGSPLLINLYPYHALVSEPQHISLDYALFQSQKPV FTDGDLEYYNLFDAMVDAFVAAMVRVVQQEDVKLVVAETGWPTAGVGSYACTENARIYNLNLRKHAIEKGCTPRKADINLEVYISEMFNENLQPDEFERN FGTFYPNLTEVYQL |
Full Sequence |
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Protein Sequence Length: 345 Download |
MLTPKIAMWI MVLTVAAIHI SMVLGGDAGI IYGRNGDNLP SPKRVIDFLT EDMNHAISLV 60 RVYDANTEVL EALSGTNLVV TIGVPDEAIA HVASSQEAAD KWFRDHVLTY VHKGVRFRYI 120 CVGNEAIPGV VQSLVPQAII NLYNSVRKAS VDYIYVTTAV GGKVLESSYP PSAGRFANGV 180 DKIMNNLTNY LYNIGSPLLI NLYPYHALVS EPQHISLDYA LFQSQKPVFT DGDLEYYNLF 240 DAMVDAFVAA MVRVVQQEDV KLVVAETGWP TAGVGSYACT ENARIYNLNL RKHAIEKGCT 300 PRKADINLEV YISEMFNENL QPDEFERNFG TFYPNLTEVY QLWR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-79 | 29 | 342 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 11 | 342 | 9 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 29 | 342 | 30 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
RefSeq | XP_002302261.1 | 0 | 22 | 344 | 1 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 29 | 343 | 1 | 309 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315775.1 | 0 | 29 | 344 | 1 | 316 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 342 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 342 | 2 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 342 | 2 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 342 | 2 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 27 | 342 | 1 | 313 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |