y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G099400.2 |
Family | GT77 |
Protein Properties | Length: 405 Molecular Weight: 46620.3 Isoelectric Point: 7.1764 |
Chromosome | Chromosome/Scaffold: 10 Start: 12122763 End: 12126957 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 155 | 352 | 0 |
LNHLVIVALDRKAYKRCMEFHAHCFALVTQGLDFHDEAYFMTLAYLEMMWRRIDFLRAVLQMGYNFVFTDADIMWFRDPFPRFFLDADFQIACDHFLGNS SDIQNRPNGGFNYVKSNNRTIEFYKFWYSSRETYPGYHDQDVLNFIKFDPFIEDLGLKMRFLDTAFFGGLCEPSKDLNLVCTMHANCCYGLDSKLHDL |
Full Sequence |
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Protein Sequence Length: 405 Download |
MNTVPLLRPQ STTRRQLPVT TKQLLRTRFT PSFPASTSMF PESNVPRAVL VFVAISVSVL 60 LLYGAADSLR FQSSSSGYSF NIFPSLRNSN NSDSKLSIND DGDDDYKLEK VLKEAAMEDK 120 TVIIATLNEA WAAPNTIIDL FLESFRIGQG TRRLLNHLVI VALDRKAYKR CMEFHAHCFA 180 LVTQGLDFHD EAYFMTLAYL EMMWRRIDFL RAVLQMGYNF VFTDADIMWF RDPFPRFFLD 240 ADFQIACDHF LGNSSDIQNR PNGGFNYVKS NNRTIEFYKF WYSSRETYPG YHDQDVLNFI 300 KFDPFIEDLG LKMRFLDTAF FGGLCEPSKD LNLVCTMHAN CCYGLDSKLH DLRIMLQDWK 360 TFLSLPPALK RSSSMLWTVP QNCSLNSLRR YDSPEKSVQQ SLQQ* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-76 | 154 | 352 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ90601.1 | 0 | 39 | 393 | 36 | 383 | putative Myb DNA binding protein [Thellungiella halophila] |
RefSeq | NP_172911.1 | 0 | 30 | 401 | 24 | 378 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002311563.1 | 0 | 107 | 383 | 1 | 277 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315829.1 | 0 | 1 | 404 | 1 | 404 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521882.1 | 0 | 9 | 399 | 18 | 391 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY276307 | 374 | 14 | 384 | 0 |
DY279129 | 337 | 13 | 347 | 0 |
GR462686 | 257 | 138 | 393 | 0 |
JG629304 | 249 | 153 | 401 | 0 |
DY267707 | 321 | 13 | 331 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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