| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.010G106400.1 |
| Family | CE11 |
| Protein Properties | Length: 317 Molecular Weight: 34632.2 Isoelectric Point: 5.872 |
| Chromosome | Chromosome/Scaffold: 10 Start: 12639328 End: 12644090 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 25 | 310 | 0 |
| QQTLKRCVEASGTTLHSGKSSTVRLLPELAGKGRYFYFNSKSIPASIDYAQESSLCTTLSNDGVKIRTVEHLLSALEAMSVDNCRIEITNLDSDDSDLDS EVPILDGSAREWVERIEKDGLVAAKDECGNDCEKLAPYLNEPIHVSKNDSFVAAFPSPKVRVSYGIDFPQVAIGSQWFSLAPLEDSLYAREIAPSRTFCI YEEVEYMRNAGLIKGGSLDNAIVCSASKGWLNPPLRFSDEPCRHKILDLVGDLSLFARFGNQGLPVAHIVVYKGGHALHTNFGRHL | |||
| Full Sequence |
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| Protein Sequence Length: 317 Download |
| MAISGALNAL KSSELVSWKP CGRVQQTLKR CVEASGTTLH SGKSSTVRLL PELAGKGRYF 60 YFNSKSIPAS IDYAQESSLC TTLSNDGVKI RTVEHLLSAL EAMSVDNCRI EITNLDSDDS 120 DLDSEVPILD GSAREWVERI EKDGLVAAKD ECGNDCEKLA PYLNEPIHVS KNDSFVAAFP 180 SPKVRVSYGI DFPQVAIGSQ WFSLAPLEDS LYAREIAPSR TFCIYEEVEY MRNAGLIKGG 240 SLDNAIVCSA SKGWLNPPLR FSDEPCRHKI LDLVGDLSLF ARFGNQGLPV AHIVVYKGGH 300 ALHTNFGRHL NDSFKS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-71 | 25 | 310 | 323 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 3.0e-82 | 25 | 316 | 297 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 2.0e-94 | 25 | 310 | 293 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 2.0e-94 | 25 | 308 | 290 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 2.0e-115 | 25 | 310 | 291 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26831.1 | 0 | 1 | 311 | 1 | 310 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173874.2 | 0 | 12 | 311 | 26 | 324 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 297 | 1 | 296 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315856.1 | 0 | 21 | 298 | 3 | 280 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526001.1 | 0 | 1 | 300 | 1 | 305 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xxe_A | 4.00001e-40 | 24 | 310 | 3 | 263 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 3p76_A | 3e-39 | 24 | 310 | 3 | 263 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2o3z_B | 3e-39 | 24 | 310 | 3 | 263 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2o3z_A | 3e-39 | 24 | 310 | 3 | 263 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2j65_B | 3e-39 | 24 | 310 | 3 | 263 | A Chain A, Structure Of Lpxc From Aquifex Aeolicus In Complex With Udp |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | UDPACYLGLCNACDEACETYL-RXN | EC-3.5.1.108 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT525853 | 180 | 138 | 317 | 0 |
| EL383503 | 282 | 9 | 289 | 0 |
| GE608060 | 283 | 1 | 281 | 0 |
| CK277774 | 280 | 8 | 286 | 0 |
| CK277774 | 27 | 285 | 311 | 0.001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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