Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G109200.1 |
Family | GH9 |
Protein Properties | Length: 497 Molecular Weight: 55186.8 Isoelectric Point: 9.4159 |
Chromosome | Chromosome/Scaffold: 10 Start: 12847696 End: 12852248 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 35 | 490 | 0 |
DYHDALRKSILFFEGQRSGKLPPDQRVKWRRDSALHDGSSVGRDLTGGYYDAGDNIKFGFPMAFTTTLLSWSIIDFGRNMGPELKNAVKAVKWATDYLLK VTAVPNVVYVQLGDAYSDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVRVFDFADSHRGAYSSSLHSAVCP FYCDVNGYQDELLWGAVWLHKASRRRRYREYIVKNEVILHAGDTINEFGWDNKHAGINVLISKEVLMGRAEYFESFKHNADGFICSILPGISHSQVQYSP GGLIFKAGGSNMQHVTSLSFLFLAYSNYLSHANKAVPCGEKTASPALLKQLAKRQVDYILGDNPLRMSYMVGYGPRYPQRIHHRGSSLPSVRAHPARIRC KEGSRYFLSPNANPNVHVGAVVGGPNVTDAFPDSRPFFQESEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 497 Download |
MARKPLITFL GNFRVTAFLL LLLLTSRQVI GGGHDYHDAL RKSILFFEGQ RSGKLPPDQR 60 VKWRRDSALH DGSSVGRDLT GGYYDAGDNI KFGFPMAFTT TLLSWSIIDF GRNMGPELKN 120 AVKAVKWATD YLLKVTAVPN VVYVQLGDAY SDHNCWERPE DMDTLRTVYK IDGSHPGSDV 180 AGETAAALAA ASIVFRSRDP AYSRLLLNRA VRVFDFADSH RGAYSSSLHS AVCPFYCDVN 240 GYQDELLWGA VWLHKASRRR RYREYIVKNE VILHAGDTIN EFGWDNKHAG INVLISKEVL 300 MGRAEYFESF KHNADGFICS ILPGISHSQV QYSPGGLIFK AGGSNMQHVT SLSFLFLAYS 360 NYLSHANKAV PCGEKTASPA LLKQLAKRQV DYILGDNPLR MSYMVGYGPR YPQRIHHRGS 420 SLPSVRAHPA RIRCKEGSRY FLSPNANPNV HVGAVVGGPN VTDAFPDSRP FFQESEPTTY 480 INAPLVGLLA FFSTHP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 12 | 496 | 485 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 34 | 493 | 460 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 34 | 496 | 466 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 35 | 490 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 32 | 490 | 463 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ15175.1 | 0 | 28 | 495 | 28 | 495 | AF357588_1 endo-1,4-beta-glucanase isoform 02 [Fragaria x ananassa] |
GenBank | ABK92482.1 | 0 | 1 | 496 | 1 | 496 | unknown [Populus trichocarpa] |
RefSeq | XP_002311518.1 | 0 | 1 | 496 | 1 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 18 | 495 | 1 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 12 | 495 | 9 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 490 | 3 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ksc_A | 0 | 34 | 490 | 3 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ks8_A | 0 | 34 | 490 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 35 | 492 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 35 | 492 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |