Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G109400.1 |
Family | CE8 |
Protein Properties | Length: 532 Molecular Weight: 58602.3 Isoelectric Point: 8.8676 |
Chromosome | Chromosome/Scaffold: 10 Start: 12867162 End: 12869570 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 216 | 515 | 0 |
DIVVAQDGSGDYKTISEAVAASAKLRSGTKSKRFVIYVKGGVYKENVEIKKSMKNLMFVGDGIDATVITSNKNTQDGTTTFRSATVGVSGKGFIARDITF ENTAGPQKHQAVALRSGSDFSVFYSCSFKGYQDTLYVHSQRQFYRDCDIYGTVDFIFGDAVAVLQNCNIYVRRPMSKQTNTVTAQGRTDPDENTGIVIHN SRVMAAPDLRPVQGSFKSYLGRPWKKYSRTVFLKSNIDGLIDPAGWLPWKGDFALSTLYYGEYMSTGSGASTKGRVKWPGYHTITSPLEAGKFTVENFLA |
Full Sequence |
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Protein Sequence Length: 532 Download |
MDKQQLVLGF LNAYFLFYSL ALVHGDSVTS CDQTPFPEAC NYFIDTNISK TPPLFALRDQ 60 SLSITMNKAI EAHQMVSSME LSSFNQQAKL AWDDCLKLYE DTVDHVNRSM SSNNLADSQT 120 WLSAAIANQR TCENGFIDFN IVSYLESLPN MLRNFTKLLS NTLSLNKAII SSTPILLDTK 180 QDGGRRRLLV DGFPSWVPAS DRKLLQSNGR AAPKADIVVA QDGSGDYKTI SEAVAASAKL 240 RSGTKSKRFV IYVKGGVYKE NVEIKKSMKN LMFVGDGIDA TVITSNKNTQ DGTTTFRSAT 300 VGVSGKGFIA RDITFENTAG PQKHQAVALR SGSDFSVFYS CSFKGYQDTL YVHSQRQFYR 360 DCDIYGTVDF IFGDAVAVLQ NCNIYVRRPM SKQTNTVTAQ GRTDPDENTG IVIHNSRVMA 420 APDLRPVQGS FKSYLGRPWK KYSRTVFLKS NIDGLIDPAG WLPWKGDFAL STLYYGEYMS 480 TGSGASTKGR VKWPGYHTIT SPLEAGKFTV ENFLAGNSWI SAAGVPFESG L* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 1.0e-175 | 29 | 531 | 535 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 1.0e-178 | 30 | 531 | 522 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 216 | 517 | 302 | + Pectinesterase. | ||
PLN02916 | PLN02916 | 0 | 82 | 531 | 457 | + pectinesterase family protein | ||
PLN02301 | PLN02301 | 0 | 62 | 531 | 477 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 5 | 531 | 3 | 507 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_173733.1 | 0 | 16 | 531 | 21 | 554 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002314796.1 | 0 | 1 | 531 | 1 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322401.1 | 0 | 15 | 531 | 9 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527782.1 | 0 | 1 | 531 | 1 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 216 | 531 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 215 | 531 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-26 | 227 | 486 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-26 | 227 | 486 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-26 | 227 | 486 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |