Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G141400.1 |
Family | GH3 |
Protein Properties | Length: 769 Molecular Weight: 83467.4 Isoelectric Point: 8.5016 |
Chromosome | Chromosome/Scaffold: 10 Start: 15298233 End: 15304245 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 321 | 0 |
AAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATAFPQVITTAASFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNVFRDPRWGRGQETPG EDPVVAGKYAASYVRGLQGNNGLRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKSCVVAGKVASVMCSYNQVNGKPTCADPYLLKN TIRGEWGLNGYIVSDCDSVGVLFDTQHYTATPEEAAASTIRAGLDLDC |
Full Sequence |
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Protein Sequence Length: 769 Download |
MADKINTLPF LLFLLCLSNH IVESREPFAC DPKLGLTRSL KFCRVNLPIH VRVRDLIGRL 60 TLQEKIRLLV NNAAAVPRLG IQGYEWWSEA LHGVSNVGPG TKFGGAFPGA TAFPQVITTA 120 ASFNESLWEE IGRVVSDEAR AMYNGGMAGL TYWSPNVNVF RDPRWGRGQE TPGEDPVVAG 180 KYAASYVRGL QGNNGLRLKV AACCKHYTAY DLDNWNGVDR YHFNARVSKQ DLEDTYNVPF 240 KSCVVAGKVA SVMCSYNQVN GKPTCADPYL LKNTIRGEWG LNGYIVSDCD SVGVLFDTQH 300 YTATPEEAAA STIRAGLDLD CGPFLAIHTE NAVKGGLLKE EDVNMALANT ITVQMRLGMF 360 DGEPSAQPFG NLGPRDVCTP AHQQLALQAA RQGIVLLQNR GRTLPLSRTL QTVAVIGPNS 420 DVTVTMIGNY AGVACGYTTP LQGIRRYAKT VHHPGCNDVF CNGNQQFNAA EVAARHADAT 480 ILVMGLDQSI EAEFRDRKGL LLPGYQQELV SIVARASRGP TILVLMSGGP IDVSFAKNDP 540 RIGAILWVGY PGQAGGAAIA DVLFGTANPG GKLPMTWYPH NYLAKVPMTN MGMRADPSRG 600 YPGRTYRFYK GPVVFPFGHG MSYTTFAHSL VQAPREVSVP LASLHVSRNT TGASNAIRVS 660 HANCEALALG VHIDVKNTGD MDGTHTLLVF SSPPGGKWST QKQLIGFEKV HLVTGSQKRV 720 KIDIHVCKHL SVVDRFGIRR IPIGEHDLYI GDLKHSISLQ ANLEEIKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 8.0e-56 | 71 | 457 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-64 | 394 | 625 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 3.0e-65 | 56 | 344 | 296 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-75 | 111 | 724 | 678 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 24 | 761 | 758 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 6 | 768 | 7 | 772 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 16 | 742 | 16 | 743 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002311398.1 | 0 | 19 | 763 | 11 | 755 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 1 | 768 | 1 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 20 | 767 | 34 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 724 | 91 | 696 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u48_A | 0 | 111 | 724 | 91 | 696 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u4a_B | 0 | 111 | 724 | 91 | 696 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3u4a_A | 0 | 111 | 724 | 91 | 696 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 2x41_A | 5.60519e-45 | 52 | 763 | 3 | 711 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |