Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G142800.1 |
Family | GH17 |
Protein Properties | Length: 373 Molecular Weight: 40556.1 Isoelectric Point: 8.7474 |
Chromosome | Chromosome/Scaffold: 10 Start: 15420940 End: 15423504 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 36 | 350 | 0 |
VGICYGMMGNNLPPATEVIALYKQHNIKRMRLYDPNQAALNALRDSGIEVMLGVPNSDLQRLSNPSDANSWVKNNVLNFWPSVKFRYIAVGNEISPVNGG TSWMAPFVLPALVNVFNAVRAAGLQDQIKVSIAVDMTLIGTSYPPSAGAFRGDVISYLAPIVGHLSYAKTPLFANIYTYFSYSGNPRDISLPYSLFTSPS VLVWDSGRGYQNLFDAMLDSLYSALERLGGGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVKGGTPKRPGKAIETYIFAMFDENQKQPELEKHF GAFSPNKQPKYNLNF |
Full Sequence |
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Protein Sequence Length: 373 Download |
MASFSSRSRT SSLTAAMLLL LGVLFMANLD MTGAQVGICY GMMGNNLPPA TEVIALYKQH 60 NIKRMRLYDP NQAALNALRD SGIEVMLGVP NSDLQRLSNP SDANSWVKNN VLNFWPSVKF 120 RYIAVGNEIS PVNGGTSWMA PFVLPALVNV FNAVRAAGLQ DQIKVSIAVD MTLIGTSYPP 180 SAGAFRGDVI SYLAPIVGHL SYAKTPLFAN IYTYFSYSGN PRDISLPYSL FTSPSVLVWD 240 SGRGYQNLFD AMLDSLYSAL ERLGGGNTLD VVVSESGWPS AGGFGTTSDN AGTYLSNLIR 300 HVKGGTPKRP GKAIETYIFA MFDENQKQPE LEKHFGAFSP NKQPKYNLNF GGHRNWDIST 360 EQNVTVSLKS DM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 65 | 342 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-158 | 36 | 350 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP87281.1 | 0 | 12 | 372 | 16 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABK96486.1 | 0 | 1 | 372 | 1 | 372 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ACZ74626.1 | 0 | 1 | 372 | 1 | 374 | beta-1,3-glucanase [Hevea brasiliensis] |
RefSeq | XP_002314934.1 | 0 | 17 | 372 | 1 | 356 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314939.1 | 0 | 42 | 351 | 1 | 310 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 35 | 350 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_C | 0 | 35 | 350 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_B | 0 | 35 | 350 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3f55_A | 0 | 35 | 350 | 1 | 315 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3em5_D | 0 | 35 | 350 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |