| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.010G149500.2 |
| Family | GH1 |
| Protein Properties | Length: 614 Molecular Weight: 70141.2 Isoelectric Point: 6.6332 |
| Chromosome | Chromosome/Scaffold: 10 Start: 15807700 End: 15812405 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 61 | 511 | 0 |
| DEFFFGLATAPAHVEDRLNDSWLQFAEENPSSVSNKDVNKVDMKKRKPLKVAMEAMIRGFEKHAEDELPTTNEECHHNVAAWHNVPHPEERLRFWSDPDT ELKLAKDTGVSVFRMGIDWTRIMPEEPVNGLKETVNFAALERYKWIITRVHSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLIVDSVSELV DYWVIFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFNQAMHWIAIAHSKAYDYIHGKSTSSESIVGVAHHVSFMRPYGLFDVAAVSVANSLTLF PYVDSISNKLDFIGINYYGQEVVCGAGLKLVDTNEYSESGRGVYPDGLYRTLIQFHERYKHLKVPYIITENGVSDETDLIRRPYILEHLLAVYAAMIMGI PVLGYFFWTISDNWEWADGYGPKFGLVAVDRENNLSRIPRPSYHLFSKVAS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 614 Download |
| MPIFALFISA AKLAGVLATV TVAANVFSFS LYRKKNLKPF KSPIDESAEI LASFNLNEGE 60 DEFFFGLATA PAHVEDRLND SWLQFAEENP SSVSNKDVNK VDMKKRKPLK VAMEAMIRGF 120 EKHAEDELPT TNEECHHNVA AWHNVPHPEE RLRFWSDPDT ELKLAKDTGV SVFRMGIDWT 180 RIMPEEPVNG LKETVNFAAL ERYKWIITRV HSYGMKVMLT LFHHSLPPWA GEYGGWKLEK 240 TVDYFMDFTR LIVDSVSELV DYWVIFNEPH VFCMLTYCAG AWPGGHPDML EVATSALPTG 300 VFNQAMHWIA IAHSKAYDYI HGKSTSSESI VGVAHHVSFM RPYGLFDVAA VSVANSLTLF 360 PYVDSISNKL DFIGINYYGQ EVVCGAGLKL VDTNEYSESG RGVYPDGLYR TLIQFHERYK 420 HLKVPYIITE NGVSDETDLI RRPYILEHLL AVYAAMIMGI PVLGYFFWTI SDNWEWADGY 480 GPKFGLVAVD RENNLSRIPR PSYHLFSKVA STGMITREDR ARAWNDLQRA AKEKKTRPFY 540 RAVNKYGLMF SGGLDQPIQR PYIERDWRFG HYEMEGLQDP LSRLSRCFLR PFSIKSKRKD 600 WKDDTELILQ PLT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01233 | lacG | 1.0e-24 | 148 | 515 | 444 | + 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK13511 | PRK13511 | 4.0e-31 | 149 | 515 | 451 | + 6-phospho-beta-galactosidase; Provisional | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-52 | 159 | 512 | 410 | + Glycosyl hydrolase family 1. | ||
| TIGR03356 | BGL | 6.0e-54 | 162 | 506 | 388 | + beta-galactosidase. | ||
| COG2723 | BglB | 4.0e-65 | 162 | 513 | 408 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ87636.1 | 0 | 1 | 612 | 1 | 635 | putative beta-glycosidase [Glycine max] |
| EMBL | CAJ87637.1 | 0 | 1 | 613 | 1 | 639 | putative beta-glycosidase [Solanum lycopersicum] |
| EMBL | CBI22845.1 | 0 | 1 | 612 | 1 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280268.1 | 0 | 1 | 612 | 1 | 644 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316058.1 | 0 | 1 | 611 | 1 | 611 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vff_A | 2e-39 | 155 | 518 | 49 | 411 | A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii |
| PDB | 1qvb_B | 3e-39 | 148 | 518 | 52 | 473 | A Chain A, Crystal Structure Of The Beta-Glycosidase From The Hyperthermophile Thermosphaera Aggregans |
| PDB | 1qvb_A | 3e-39 | 148 | 518 | 52 | 473 | A Chain A, Crystal Structure Of The Beta-Glycosidase From The Hyperthermophile Thermosphaera Aggregans |
| PDB | 3ta9_B | 6e-39 | 161 | 515 | 71 | 455 | A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii |
| PDB | 3ta9_A | 6e-39 | 161 | 515 | 71 | 455 | A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
