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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G160200.2 |
Family | GT35 |
Protein Properties | Length: 722 Molecular Weight: 81760.1 Isoelectric Point: 5.3463 |
Chromosome | Chromosome/Scaffold: 10 Start: 16616169 End: 16622716 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 35 | 716 | 0 |
ALRKLGHELEDVAGQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIVRNDVSYSVKFYGEVISKP DGSKEWIGGENITAVAYDVPIPGYKTKTTINLRLWSTKVAPNEFDLRAYNAGDHAKACAALKNAEKICYILYPGDESTEGKILRLKQQYTLCSASLQDII AHFERRSGKPVNWENFPDKVAVQMNDTHPTLCIPELIRILIDLKGLSWKESWYITQRTVAYTNHTVLPEALEKWSLDLLQKLLPRHVEIIRMIDEESEEQ DTDAKDVVTFDPDPNLPKMVRMANLCVVGGYAVNGVAEIHSEIVKNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWTGTDDWVLNTEKL STLAEFSDNEDLQSEWREAKKRNKIKVADFLKEKTGYIVNPDAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKEMSPEERKARYVPRVCIFGGKAFATYV QAKRIVKFITDVGTTVNHDADIGDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEDNFFLFGAE AHEIAGLRKERAEGKFIPDPRFEEVKAFVRNGVFGHYNYEELMGSLEGNEGYGRADYFLVGKDFPSYVECQEKVDEAYKDQK |
Full Sequence |
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Protein Sequence Length: 722 Download |
MNVKQAYYLS MEYLQGRALL NAIGNLELSG AYADALRKLG HELEDVAGQE PDAALGNGGL 60 GRLASCFLDS LATLNYPAWG YGLRYKYGLF KQLITKDGQE EVAENWLEMG NPWEIVRNDV 120 SYSVKFYGEV ISKPDGSKEW IGGENITAVA YDVPIPGYKT KTTINLRLWS TKVAPNEFDL 180 RAYNAGDHAK ACAALKNAEK ICYILYPGDE STEGKILRLK QQYTLCSASL QDIIAHFERR 240 SGKPVNWENF PDKVAVQMND THPTLCIPEL IRILIDLKGL SWKESWYITQ RTVAYTNHTV 300 LPEALEKWSL DLLQKLLPRH VEIIRMIDEE SEEQDTDAKD VVTFDPDPNL PKMVRMANLC 360 VVGGYAVNGV AEIHSEIVKN EVFNEFYKLW PEKFQNKTNG VTPRRWIRFC NPDLSKIITK 420 WTGTDDWVLN TEKLSTLAEF SDNEDLQSEW REAKKRNKIK VADFLKEKTG YIVNPDAMFD 480 VQVKRIHEYK RQLLNIMGIV YRYKKMKEMS PEERKARYVP RVCIFGGKAF ATYVQAKRIV 540 KFITDVGTTV NHDADIGDLL KVVFVPDYNV SVAEVLIPGS ELSQHISTAG MEASGTSNMK 600 FAMNGCILIG TLDGANVEIR QEVGEDNFFL FGAEAHEIAG LRKERAEGKF IPDPRFEEVK 660 AFVRNGVFGH YNYEELMGSL EGNEGYGRAD YFLVGKDFPS YVECQEKVDE AYKDQKVSSI 720 C* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 2 | 716 | 733 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 2 | 716 | 729 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 35 | 716 | 694 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14985 | PRK14985 | 0 | 8 | 716 | 728 | + maltodextrin phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 2 | 715 | 721 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA59464.1 | 0 | 1 | 716 | 152 | 933 | alpha-glucan phosphorylase [Spinacia oleracea] |
EMBL | CBI27267.1 | 0 | 1 | 716 | 136 | 895 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189578.1 | 0 | 1 | 716 | 146 | 924 | glucan phosphorylase, putative [Arabidopsis thaliana] |
Swiss-Prot | P53537 | 0 | 4 | 716 | 86 | 804 | PHSH_VICFA RecName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H |
RefSeq | XP_002279075.1 | 0 | 1 | 716 | 143 | 920 | PREDICTED: similar to Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 4 | 716 | 97 | 842 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 4 | 716 | 97 | 842 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1xoi_B | 0 | 4 | 716 | 80 | 795 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 1xoi_A | 0 | 4 | 716 | 80 | 795 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
PDB | 3cem_B | 0 | 4 | 716 | 58 | 773 | A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797178 | 362 | 355 | 716 | 0 |
HO418036 | 539 | 161 | 669 | 0 |
HO778303 | 362 | 355 | 716 | 0 |
HO778303 | 330 | 1 | 330 | 0 |
HO613954 | 364 | 353 | 716 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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