Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G177300.2 |
Family | GH9 |
Protein Properties | Length: 447 Molecular Weight: 50410.3 Isoelectric Point: 9.3944 |
Chromosome | Chromosome/Scaffold: 10 Start: 17686228 End: 17689140 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 1 | 410 | 0 |
MAFAMTMLSWSVIEYSQKYEAIGEYKHTRDLIKWGTDYLLLTFNSSASKIDKIYCQVGGSQNGSRQPDDHYCWQRPEDMDYPRPSRAVNAGSDLAGEMAA ALAAASIIFRDDEVYSKKLVRGAETVYAFARDLGKRQPYSRGKPYIEPFYNSTGYYDEFIWGATWLYYATGNVNYIRWATEPGFSKHSKALYRISDLSVL SWDNKLPAAMLLLTRCRIFLNPGYPYEEMLHMYHNKTELNMCSYLQQFNVFNWTKGGMIQLSSGRPQPLQYVANTAFLASLFVDYLNATRVPGFQCGSKF IPLDVLRSFATSQINYILGDNPMKMSYVVGYGTKFPRHIHHRGASIPNDKRSYSCTGGWKWRDSPKPNPNNITGAMVGGPDRFDRFRDVRKNYNFTEPTL AGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 447 Download |
MAFAMTMLSW SVIEYSQKYE AIGEYKHTRD LIKWGTDYLL LTFNSSASKI DKIYCQVGGS 60 QNGSRQPDDH YCWQRPEDMD YPRPSRAVNA GSDLAGEMAA ALAAASIIFR DDEVYSKKLV 120 RGAETVYAFA RDLGKRQPYS RGKPYIEPFY NSTGYYDEFI WGATWLYYAT GNVNYIRWAT 180 EPGFSKHSKA LYRISDLSVL SWDNKLPAAM LLLTRCRIFL NPGYPYEEML HMYHNKTELN 240 MCSYLQQFNV FNWTKGGMIQ LSSGRPQPLQ YVANTAFLAS LFVDYLNATR VPGFQCGSKF 300 IPLDVLRSFA TSQINYILGD NPMKMSYVVG YGTKFPRHIH HRGASIPNDK RSYSCTGGWK 360 WRDSPKPNPN NITGAMVGGP DRFDRFRDVR KNYNFTEPTL AGNAGLVAAL SSLTSSGGIG 420 IDKNRMFSAV PPLYPPSPPP PPAWKP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 8.0e-84 | 1 | 403 | 413 | + endoglucanase | ||
PLN00119 | PLN00119 | 1.0e-85 | 1 | 398 | 407 | + endoglucanase | ||
PLN02266 | PLN02266 | 3.0e-88 | 1 | 398 | 410 | + endoglucanase | ||
PLN02345 | PLN02345 | 4.0e-116 | 1 | 399 | 409 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-124 | 1 | 403 | 409 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 430 | 183 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | XP_002266444.1 | 0 | 1 | 430 | 174 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312211.1 | 0 | 1 | 446 | 175 | 620 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315101.1 | 0 | 1 | 446 | 176 | 621 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 430 | 179 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 1 | 417 | 65 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 1 | 417 | 65 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 1 | 417 | 65 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ia7_A | 1e-38 | 2 | 411 | 68 | 424 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ia6_A | 1e-38 | 2 | 411 | 68 | 424 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO796213 | 431 | 2 | 430 | 0 |
BF010444 | 434 | 2 | 430 | 0 |
HO794674 | 431 | 2 | 430 | 0 |
DT516843 | 223 | 208 | 430 | 0 |
EY765225 | 301 | 84 | 384 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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