Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G183600.1 |
Family | AA1 |
Protein Properties | Length: 576 Molecular Weight: 63672.9 Isoelectric Point: 8.6355 |
Chromosome | Chromosome/Scaffold: 10 Start: 18083562 End: 18086639 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 561 | 0 |
AEIHHHDFVVQATKVKRLCKTHNSITVNGMFPGPTLEVKNGDTLVVKVVNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFNIEGQEGT LWWHAHSSWLRATVYGALIIHPREGSSYPFAKPKRETPILLGEWWDANPVDVVREATRTGAAPNISDAYTINGQPGDLYNCSSEDTTIVPIASGETNLLR VINAALNQPLFFTIANHKFTVIGADASYLKPFTTSVIMLGPGQTTDVLISGDQLPGRYYMAARAYQSAQNAPFDNTTTTAILEYKSALCPAKCTTKPVMP RLPAYNDTATVTAFSGSLRSPRKVEVPTDIDENLFFTIGLGLNNCPKNSRARRCQGPNGTRFTASMNNVSFVFPSNIALLQAYQQKVPGIYTTDFPAKPP VKFDYTGNVSRSLFQPVRGTKLYKLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAEGFGNFNPKTHKSKFNLVDPPMRNTVAVPSNGWAVIRFVAD NPGVWLMHCHLDVHITWGLAMAFLVEDGIGE |
Full Sequence |
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Protein Sequence Length: 576 Download |
MEVIKSIFAD RHCSFFLVVL LLASTMSLAI AEIHHHDFVV QATKVKRLCK THNSITVNGM 60 FPGPTLEVKN GDTLVVKVVN KARYNVTIHW HGIRQMRTGW ADGPEFVTQC PIRPGGSYTY 120 RFNIEGQEGT LWWHAHSSWL RATVYGALII HPREGSSYPF AKPKRETPIL LGEWWDANPV 180 DVVREATRTG AAPNISDAYT INGQPGDLYN CSSEDTTIVP IASGETNLLR VINAALNQPL 240 FFTIANHKFT VIGADASYLK PFTTSVIMLG PGQTTDVLIS GDQLPGRYYM AARAYQSAQN 300 APFDNTTTTA ILEYKSALCP AKCTTKPVMP RLPAYNDTAT VTAFSGSLRS PRKVEVPTDI 360 DENLFFTIGL GLNNCPKNSR ARRCQGPNGT RFTASMNNVS FVFPSNIALL QAYQQKVPGI 420 YTTDFPAKPP VKFDYTGNVS RSLFQPVRGT KLYKLKYGSR VQIVLQDTSI VTPENHPIHL 480 HGYDFYIIAE GFGNFNPKTH KSKFNLVDPP MRNTVAVPSN GWAVIRFVAD NPGVWLMHCH 540 LDVHITWGLA MAFLVEDGIG ELQSVEPPPA DLPIC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 3.0e-56 | 39 | 155 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-70 | 17 | 553 | 576 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-79 | 15 | 564 | 592 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-90 | 33 | 559 | 572 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 575 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 26 | 575 | 1 | 550 | unknown [Populus trichocarpa] |
EMBL | CAA74104.1 | 0 | 1 | 575 | 1 | 574 | laccase [Populus trichocarpa] |
RefSeq | XP_002312186.1 | 0 | 1 | 575 | 1 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 575 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 31 | 575 | 32 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 553 | 1 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asq_A | 0 | 31 | 553 | 1 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_B | 0 | 31 | 553 | 1 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_A | 0 | 31 | 553 | 1 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aso_B | 0 | 31 | 553 | 1 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |