| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.010G193700.1 |
| Family | GH17 |
| Protein Properties | Length: 355 Molecular Weight: 39401.6 Isoelectric Point: 8.5929 |
| Chromosome | Chromosome/Scaffold: 10 Start: 18809599 End: 18810964 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 24 | 325 | 0 |
| DRVLSALSSLNIHSLRLPNPDPNLIRSFAFTNTSLFLSIPNSLLPPLAANRSLAARWLYGHVLPFYPRSKISLISVGDDAVSQLSPFLLPAIRNVYLALR DLGIKKISVSTTFSFVNVITTPFPPSSGTFQEPLGELLIKPLLQFLEDTNSSFLVNLYPYNLYRINSEIPLGFALFQEHPFNFRDDLITGVRYWNLFDMM VDAVVSALAVAGHENLPVIVAETGWPSTGGDQTEVDAKLEYAEMYIRGLVGHLRSGVGTPLRKEGVSQAYIFELIDKDNVKQGTRSWGILYANMSKKYHV EF | |||
| Full Sequence |
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| Protein Sequence Length: 355 Download |
| PPPTWHPLPS PFKLSRYITT HIADRVLSAL SSLNIHSLRL PNPDPNLIRS FAFTNTSLFL 60 SIPNSLLPPL AANRSLAARW LYGHVLPFYP RSKISLISVG DDAVSQLSPF LLPAIRNVYL 120 ALRDLGIKKI SVSTTFSFVN VITTPFPPSS GTFQEPLGEL LIKPLLQFLE DTNSSFLVNL 180 YPYNLYRINS EIPLGFALFQ EHPFNFRDDL ITGVRYWNLF DMMVDAVVSA LAVAGHENLP 240 VIVAETGWPS TGGDQTEVDA KLEYAEMYIR GLVGHLRSGV GTPLRKEGVS QAYIFELIDK 300 DNVKQGTRSW GILYANMSKK YHVEFSGCGG SGVGRVLSMR VCLVWWLLAG FFLV* 360 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0005 | 238 | 316 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-66 | 23 | 325 | 309 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 25 | 279 | 51 | 307 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 24 | 329 | 50 | 357 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 25 | 348 | 51 | 383 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 23 | 354 | 61 | 392 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 24 | 326 | 52 | 357 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 2.99878e-43 | 25 | 325 | 17 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 9.99995e-41 | 26 | 325 | 18 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 9.99995e-41 | 26 | 325 | 18 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 2e-38 | 23 | 325 | 15 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 2e-38 | 23 | 325 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY304294 | 215 | 24 | 235 | 0 |
| DT736828 | 226 | 108 | 330 | 0 |
| DR933811 | 222 | 112 | 330 | 0 |
| HO840922 | 236 | 58 | 279 | 0 |
| CK292904 | 226 | 24 | 242 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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