y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G232700.1 |
Family | GT64 |
Protein Properties | Length: 848 Molecular Weight: 96037.5 Isoelectric Point: 8.8317 |
Chromosome | Chromosome/Scaffold: 10 Start: 21390086 End: 21395028 |
Description | glycosyltransferase family protein 47 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT64 | 601 | 836 | 0 |
FTLLTMTYDARLWNLKMYVRHYSRCSSVKEIIVVWNKGIPPRSSDLDSTVPVRIRVEDQNSLNNRFKKDPMIKTRAVLELDDDIMMSCDDIERGFNVWRQ HPDRIVGFYPRLVRGSPLKYRDDKYARRHESYNMILTGAAFIDRTLAFERYWSSEAKAGRELVDRYFNCEDVLLNYLYANASSSQTVEYVRPTWVIDTSK FTGVAISKNTNVHYEIRSNCLLKFSDIYGSIAGRKW |
Full Sequence |
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Protein Sequence Length: 848 Download |
MGVYEAGVNG TDGTATATTC SCWNTSMRCW CRWRWENHQQ QQQQHNVLRQ RLVSLVFSSG 60 FTFFLGYLVL YGSIGMFYAW LMFSKPYLRS TNAGVGLKSL GCQEDNEGSW SIGVFYGDSP 120 FSLKPIEAMN EWRDEGAAWP IANPVVTCAS LSDAGFPSNF VADPFLYVQD WIQEFGNSTD 180 EITTKFLCVL FYLALGVFVS GMRASSWKGG EGGRIRKLME DLSGVESILR TGDTLFLFYE 240 TKNSITSQGD IGVAKSIDKG ATWQQLGIAL DEDWHLSYPY VFNYLGQIYM MPESSQKGEL 300 RLYRALNFPL QWTLDKVLIK NPLVDSFIIN RAGEYWLFGS DHSGVGTRKN GQLEIWYSSS 360 PLGPWKPHKK NPIYNVDKSV GARNGGRPFV YDGNLYRVGQ DCGETYGRRV RIFKVEVLTK 420 DDYKEVEVPL GFEESNKGPN AWNGARYHHL DVQQLSSGKW IAVMDGDRVP SGDPVHRFIL 480 GSASFAAVTV VVVVLGVLLG AVKCIIPLNW CAHFSGKRNN ALLGRERLNL FSSKVRRFCS 540 RLNRVPLSVR GKIKPNTWAG KLVLAVIFAV GIALMCAGVK YFYGGNGAEE AYPLNGSYSQ 600 FTLLTMTYDA RLWNLKMYVR HYSRCSSVKE IIVVWNKGIP PRSSDLDSTV PVRIRVEDQN 660 SLNNRFKKDP MIKTRAVLEL DDDIMMSCDD IERGFNVWRQ HPDRIVGFYP RLVRGSPLKY 720 RDDKYARRHE SYNMILTGAA FIDRTLAFER YWSSEAKAGR ELVDRYFNCE DVLLNYLYAN 780 ASSSQTVEYV RPTWVIDTSK FTGVAISKNT NVHYEIRSNC LLKFSDIYGS IAGRKWEFNG 840 RKDGWDL* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd08994 | GH43_like_2 | 0.0007 | 315 | 412 | 100 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
pfam09258 | Glyco_transf_64 | 2.0e-72 | 601 | 829 | 231 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. |
Gene Ontology | |
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GO Term | Description |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0031227 | intrinsic to endoplasmic reticulum membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_196070.2 | 2e-32 | 61 | 185 | 41 | 164 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
RefSeq | NP_196070.2 | 0 | 232 | 847 | 148 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
RefSeq | XP_002262646.1 | 0 | 92 | 847 | 63 | 756 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315348.1 | 0 | 1 | 847 | 1 | 847 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532924.1 | 0 | 82 | 847 | 1 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1on8_B | 4e-24 | 593 | 828 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
PDB | 1on8_A | 4e-24 | 593 | 828 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
PDB | 1on6_B | 4e-24 | 593 | 828 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
PDB | 1on6_A | 4e-24 | 593 | 828 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
PDB | 1omz_B | 4e-24 | 593 | 828 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |