Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G255200.2 |
Family | GH27 |
Protein Properties | Length: 344 Molecular Weight: 38138.7 Isoelectric Point: 6.7118 |
Chromosome | Chromosome/Scaffold: 10 Start: 22534295 End: 22538305 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 82 | 259 | 0 |
TMPGSLGHEEQDAKSFASWGIDYLKYDNCNNDGTKPTVRYPVMTRALMKTGHPIFFSLCEWGDMHPATWGAKVGNSWRTTNDISDTWDSMVSRADMNEVY AELARPGGWNDPDMLEVGNGGMTKDEYTLHFSIWAISKAPLLLGCDVRNMTKETMDIIANKEVIAVNQDPLGVQAKKV |
Full Sequence |
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Protein Sequence Length: 344 Download |
MVLPTLLPWA DFLVSTGLSK LGYTYVNIDD CWAEMARDGK GNLVPKKSTF PSGIKALADY 60 VHSKGLKLGI YSDAGYFTCS KTMPGSLGHE EQDAKSFASW GIDYLKYDNC NNDGTKPTVR 120 YPVMTRALMK TGHPIFFSLC EWGDMHPATW GAKVGNSWRT TNDISDTWDS MVSRADMNEV 180 YAELARPGGW NDPDMLEVGN GGMTKDEYTL HFSIWAISKA PLLLGCDVRN MTKETMDIIA 240 NKEVIAVNQD PLGVQAKKVR MEGDLEIWAG PLAGYRVAVL LVNRGPWRNS ISAQWDDIGI 300 PLNSIVKARD LWEHKTLKTH FVGNLTATMD SHACKMYILK PIS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 7.0e-16 | 20 | 225 | 289 | + Melibiase. | ||
PLN03231 | PLN03231 | 1.0e-19 | 13 | 253 | 327 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 1.0e-165 | 10 | 343 | 337 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 10 | 343 | 334 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 10 | 341 | 332 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55266.1 | 0 | 10 | 343 | 80 | 413 | acid alpha galactosidase 1 [Cucumis sativus] |
EMBL | CAN75822.1 | 0 | 5 | 343 | 17 | 355 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270791.1 | 0 | 5 | 343 | 70 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316426.1 | 0 | 10 | 343 | 36 | 369 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513158.1 | 0 | 10 | 343 | 79 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 10 | 341 | 32 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 6 | 336 | 28 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 10 | 341 | 42 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 10 | 341 | 42 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 10 | 284 | 42 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX125400 | 298 | 47 | 344 | 0 |
EX125352 | 298 | 47 | 344 | 0 |
FE528789 | 316 | 30 | 343 | 0 |
HO782101 | 299 | 46 | 344 | 0 |
HO782101 | 37 | 10 | 46 | 0.000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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