y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G255200.3 |
Family | GH27 |
Protein Properties | Length: 318 Molecular Weight: 35288.3 Isoelectric Point: 6.7117 |
Chromosome | Chromosome/Scaffold: 10 Start: 22535679 End: 22538305 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 56 | 153 | 1e-32 |
TMPGSLGHEEQDAKSFASWGIDYLKYDNCNNDGTKPTVRYPVMTRALMKTGHPIFFSLCEWGDMHPATWGAKVGNSWRTTNDISDTWDSMVSRADMNE |
Full Sequence |
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Protein Sequence Length: 318 Download |
MLDDCWAEMA RDGKGNLVPK KSTFPSGIKA LADYVHSKGL KLGIYSDAGY FTCSKTMPGS 60 LGHEEQDAKS FASWGIDYLK YDNCNNDGTK PTVRYPVMTR ALMKTGHPIF FSLCEWGDMH 120 PATWGAKVGN SWRTTNDISD TWDSMVSRAD MNEVYAELAR PGGWNDPDML EVGNGGMTKD 180 EYTLHFSIWA ISKAPLLLGC DVRNMTKETM DIIANKEVIA VNQDPLGVQA KKVRMEGDLE 240 IWAGPLAGYR VAVLLVNRGP WRNSISAQWD DIGIPLNSIV KARDLWEHKT LKTHFVGNLT 300 ATMDSHACKM YILKPIS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 1.0e-14 | 2 | 199 | 281 | + Melibiase. | ||
PLN03231 | PLN03231 | 3.0e-17 | 12 | 227 | 286 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 1.0e-154 | 2 | 317 | 319 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 2 | 317 | 316 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 2 | 315 | 314 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM13199.1 | 0 | 2 | 317 | 95 | 410 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
EMBL | CAN75822.1 | 0 | 2 | 317 | 40 | 355 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270791.1 | 0 | 2 | 317 | 93 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316426.1 | 0 | 2 | 317 | 54 | 369 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513158.1 | 0 | 2 | 317 | 97 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 2 | 315 | 50 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 1 | 310 | 49 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 2 | 315 | 60 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 2 | 315 | 60 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 2 | 258 | 60 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX125400 | 298 | 21 | 318 | 0 |
EX125352 | 298 | 21 | 318 | 0 |
FE528789 | 316 | 4 | 317 | 0 |
HO782101 | 299 | 20 | 318 | 0 |
CV256735 | 247 | 72 | 318 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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