Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G255200.4 |
Family | GH27 |
Protein Properties | Length: 262 Molecular Weight: 29219.3 Isoelectric Point: 6.1592 |
Chromosome | Chromosome/Scaffold: 10 Start: 22535788 End: 22538305 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 2 | 97 | 5e-33 |
PGSLGHEEQDAKSFASWGIDYLKYDNCNNDGTKPTVRYPVMTRALMKTGHPIFFSLCEWGDMHPATWGAKVGNSWRTTNDISDTWDSMVSRADMNE |
Full Sequence |
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Protein Sequence Length: 262 Download |
MPGSLGHEEQ DAKSFASWGI DYLKYDNCNN DGTKPTVRYP VMTRALMKTG HPIFFSLCEW 60 GDMHPATWGA KVGNSWRTTN DISDTWDSMV SRADMNEVYA ELARPGGWND PDMLEVGNGG 120 MTKDEYTLHF SIWAISKAPL LLGCDVRNMT KETMDIIANK EVIAVNQDPL GVQAKKVRME 180 GDLEIWAGPL AGYRVAVLLV NRGPWRNSIS AQWDDIGIPL NSIVKARDLW EHKTLKTHFV 240 GNLTATMDSH ACKMYILKPI S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02899 | PLN02899 | 4.0e-13 | 13 | 166 | 177 | + alpha-galactosidase | ||
PLN03231 | PLN03231 | 3.0e-16 | 13 | 171 | 183 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 1.0e-121 | 2 | 261 | 263 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 6.0e-144 | 1 | 259 | 259 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 1 | 261 | 261 | + alpha-galactosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55266.1 | 0 | 1 | 261 | 153 | 413 | acid alpha galactosidase 1 [Cucumis sativus] |
EMBL | CAN75822.1 | 0 | 1 | 261 | 95 | 355 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270791.1 | 0 | 1 | 261 | 148 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316426.1 | 0 | 1 | 261 | 109 | 369 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513158.1 | 0 | 1 | 261 | 152 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 259 | 105 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 3 | 254 | 106 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 2 | 259 | 115 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 2 | 259 | 115 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 1.4013e-45 | 2 | 246 | 125 | 407 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV256735 | 247 | 16 | 262 | 0 |
EX125400 | 262 | 1 | 262 | 0 |
EX125352 | 262 | 1 | 262 | 0 |
FY448974 | 260 | 1 | 260 | 0 |
HO800925 | 262 | 1 | 262 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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