Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G025400.1 |
Family | CE8 |
Protein Properties | Length: 558 Molecular Weight: 60760.3 Isoelectric Point: 9.0337 |
Chromosome | Chromosome/Scaffold: 11 Start: 2105410 End: 2108297 |
Description | methylesterase PCR A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 246 | 542 | 0 |
DVTVAKDGSGKYKTVKEAVASAPDNGKTRYVIYVKKGTYKENVEVGKKKKNVMLVGDGMDSTIITGSLNVVDGSTTFNSATVAAVGDGFIAQDIWFQNTA GPEKHQAVALRVGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGNAAVVLQNCKLVPRKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDII ASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDPAGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVNWAGYHVITSANEAKKFTVAELIQG |
Full Sequence |
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Protein Sequence Length: 558 Download |
MEKANTATMA TMNTPLLATP KTSRRKTICL VLSMVAILSS TTLVTMRYYT KTDPSSPPGL 60 LQNLCDHAYD QESCLAMVSQ IASNTSTKMS QVGLLQLLLG KSTPHIQNTI EKAKVIHSRI 120 NDAREQAALG DCVELMEISK YRIKDTIVAL ERVTSKSHAN ALTWLSSVLT NHDTCLDGLN 180 GPARSTMEPD LNDLILRART SLAILAAISP SKENNDIFSL KEDFPSWLPS MDRKLLVALP 240 KDINADVTVA KDGSGKYKTV KEAVASAPDN GKTRYVIYVK KGTYKENVEV GKKKKNVMLV 300 GDGMDSTIIT GSLNVVDGST TFNSATVAAV GDGFIAQDIW FQNTAGPEKH QAVALRVGAD 360 QSVINRCRID AYQDTLYTHS LRQFYRDSYI TGTVDFIFGN AAVVLQNCKL VPRKPMSGQK 420 NMVTAQGRTD PNQNTGTSIQ KCDIIASSDL TPVKSSFKSF LGRPWKEYSR TVVMQSNIGD 480 LIDPAGWSAW DGEFALKTLY YGEYLNQGAG AGTSKRVNWA GYHVITSANE AKKFTVAELI 540 QGGVWLKSTG VSYTEGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-166 | 21 | 553 | 576 | + pectinesterase | ||
PLN02488 | PLN02488 | 3.0e-167 | 64 | 557 | 509 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 6.0e-168 | 20 | 557 | 571 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 22 | 557 | 536 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 246 | 542 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA47810.1 | 0 | 63 | 557 | 53 | 554 | pectinesterase [Pisum sativum] |
EMBL | CAD29733.1 | 0 | 63 | 557 | 53 | 554 | pectin methylesterase [Sesbania rostrata] |
RefSeq | XP_002266980.1 | 0 | 80 | 557 | 52 | 528 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317208.1 | 0 | 9 | 557 | 1 | 549 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518523.1 | 0 | 9 | 557 | 1 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 243 | 557 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 243 | 557 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-21 | 244 | 515 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 244 | 515 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-21 | 244 | 515 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |