Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G044300.1 |
Family | GH35 |
Protein Properties | Length: 850 Molecular Weight: 94660.1 Isoelectric Point: 5.848 |
Chromosome | Chromosome/Scaffold: 11 Start: 3756775 End: 3765905 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 43 | 346 | 0 |
LVIDGKRRVLQSGSIHYPRTTPEVWPEIIRKSKEGGLDVIETYVFWNYHEPVRGQYYFEGRFDLVRFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLH FIPGVQFRTSNDIFKNAMKSFLTKIVDLMKDDNLFASQGGPIILAQVENEYGNVQWAYGVGGELYVKWAAETAISLNTTVPWVMCVQEDAPDPVINTCNG FYCDQFTPNSPSKPKMWTENYSGWFLAFGYAVPYRPVEDLAFAVARFFEYGGSFQNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEYGFIRQPKWGHLR DLHS |
Full Sequence |
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Protein Sequence Length: 850 Download |
MTSGIMGRKN SCLALVLLVV LVFQCVWVER VWCVTVTYDH KALVIDGKRR VLQSGSIHYP 60 RTTPEVWPEI IRKSKEGGLD VIETYVFWNY HEPVRGQYYF EGRFDLVRFV KTVQEAGLFV 120 HLRIGPYACA EWNYGGFPLW LHFIPGVQFR TSNDIFKNAM KSFLTKIVDL MKDDNLFASQ 180 GGPIILAQVE NEYGNVQWAY GVGGELYVKW AAETAISLNT TVPWVMCVQE DAPDPVINTC 240 NGFYCDQFTP NSPSKPKMWT ENYSGWFLAF GYAVPYRPVE DLAFAVARFF EYGGSFQNYY 300 MYFGGTNFGR TAGGPLVATS YDYDAPIDEY GFIRQPKWGH LRDLHSAIKQ CEEYLVSSDP 360 VHQQLGNKLE AHVYYKHSND CAAFLANYDS GSDANVTFNG NTYFLPAWSV SILADCKNVI 420 FNTAKVVTQR HIGDALFSRS TTVDGNLVAA SPWSWYKEEV GIWGNNSFTK PGLLEQINTT 480 KDTSDFLWYS TSLYVEAGQD KEHLLNIESL GHAALVFVNK RFVAFGYGNH DDASFSLTRE 540 ISLEEGNNTL DVLSMLIGVQ NYGPWFDVQG AGIHSVFLVD LHKSKKDLSS GKWTYQVGLE 600 GEYLGLDNVS LANSSLWSQG TSLPVNKSLI WYKATIIAPE GNGPLALNLA SMGKGQAWIN 660 GQSIGRYWSA YLSPSAGCTD NCDYRGAYNS FKCQKKCGQP AQTLYHIPRT WVHPGENLLV 720 LHEELGGDPS QISLLTRTGQ DICSIVSEDD PPPADSWKPN LEFMSQSPEV RLTCEHGWHI 780 AAINFASFGT PEGKCGTFTP GNCHADMLTI VQKACIGHER CSIPISAAKL GDPCPGVVKR 840 FVVEALCSE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 58 | 194 | 147 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-19 | 772 | 847 | 80 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-20 | 36 | 338 | 354 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-153 | 42 | 348 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 23 | 848 | 837 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24373.1 | 0 | 13 | 848 | 7 | 861 | unknown [Picea sitchensis] |
EMBL | CBI16297.1 | 0 | 35 | 848 | 25 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002317239.1 | 0 | 1 | 849 | 1 | 849 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521428.1 | 0 | 6 | 849 | 1 | 841 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002530296.1 | 0 | 6 | 848 | 1 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.94273e-44 | 35 | 344 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.001 | 489 | 742 | 387 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-35 | 36 | 353 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-35 | 36 | 353 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |