Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G084900.1 |
Family | GH17 |
Protein Properties | Length: 476 Molecular Weight: 52714.7 Isoelectric Point: 7.5481 |
Chromosome | Chromosome/Scaffold: 11 Start: 8951958 End: 8953838 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 133 | 449 | 0 |
LGINYGQVGNNLPQPENVLDLLISLKLTKARIYDTNPQILTAFSNSNVELIVTIENQMLAVLMDPQQALQWVSTHIKPYFPATRITGIAVGNEVFTDDDT TLLAYLVPAVVNIHSALAQLGLDRYIQVSTPNSLAVLAESFPPSAGTFKTEVSGVMSQFLHFLSNTKSPFWINAYPYFAYKDKPDDIPLDYVLFKPNSGM VDPYTKLHYDNMLYAQVDAVIFAIARMGFNGIEVRVSETGWPSKGDSDEVGATIENAAAYNKNILRRQLNSEGTPLRPNMRLEVYLFALFNEDLKPGPTS ERNYGLFQPDCSMAYNV |
Full Sequence |
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Protein Sequence Length: 476 Download |
MPLYLSNKIS LCFCPKKVAG GHFGNRELGV GHDWKETRQT KGKALSEENE KNHTCSPFKT 60 GFRVTLYLVL LSISILFQFL FRTPKILLLC LSHCLSLNSM ALLLSRIAMI HIFPILFLTF 120 SDNYGFLRGI NSLGINYGQV GNNLPQPENV LDLLISLKLT KARIYDTNPQ ILTAFSNSNV 180 ELIVTIENQM LAVLMDPQQA LQWVSTHIKP YFPATRITGI AVGNEVFTDD DTTLLAYLVP 240 AVVNIHSALA QLGLDRYIQV STPNSLAVLA ESFPPSAGTF KTEVSGVMSQ FLHFLSNTKS 300 PFWINAYPYF AYKDKPDDIP LDYVLFKPNS GMVDPYTKLH YDNMLYAQVD AVIFAIARMG 360 FNGIEVRVSE TGWPSKGDSD EVGATIENAA AYNKNILRRQ LNSEGTPLRP NMRLEVYLFA 420 LFNEDLKPGP TSERNYGLFQ PDCSMAYNVG LSALSSPSTP SASISLTSSA TKVKT* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 364 | 442 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-92 | 133 | 449 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193568.2 | 0 | 108 | 474 | 11 | 375 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 101 | 450 | 3 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 130 | 451 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 100 | 475 | 1 | 376 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 109 | 450 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 133 | 452 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_C | 0 | 133 | 452 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_B | 0 | 133 | 452 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_A | 0 | 133 | 452 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3em5_D | 0 | 133 | 452 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |