| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.011G129400.2 |
| Family | AA6 |
| Protein Properties | Length: 193 Molecular Weight: 20353.4 Isoelectric Point: 6.0114 |
| Chromosome | Chromosome/Scaffold: 11 Start: 15446935 End: 15450637 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 1 | 187 | 0 |
| MYGHVEKLAEEIRKGASSVEGVEAKLWQVPEILPEEVLGMMSAPPKSDVPIITPSELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWKTQQLAGKPAG MFFSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAGDGSRQPTELELEQAFHQGKHIAAITKK | |||
| Full Sequence |
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| Protein Sequence Length: 193 Download |
| MYGHVEKLAE EIRKGASSVE GVEAKLWQVP EILPEEVLGM MSAPPKSDVP IITPSELAEA 60 DGFVFGFPTR FGMMAAQFKA FLDATGGLWK TQQLAGKPAG MFFSTGSQGG GQETTALTAI 120 TQLVHHGMIF VPIGYTFGAG MFEMEKVKGG SPYGAGTFAG DGSRQPTELE LEQAFHQGKH 180 IAAITKKLKG AA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00258 | Flavodoxin_1 | 0.0002 | 1 | 99 | 111 | + Flavodoxin. |
| pfam03358 | FMN_red | 3.0e-11 | 6 | 135 | 131 | + NADPH-dependent FMN reductase. |
| COG0655 | WrbA | 6.0e-36 | 1 | 190 | 197 | + Multimeric flavodoxin WrbA [General function prediction only] |
| TIGR01755 | flav_wrbA | 3.0e-57 | 1 | 188 | 189 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. |
| PRK03767 | PRK03767 | 3.0e-68 | 1 | 190 | 191 | + NAD(P)H:quinone oxidoreductase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050662 | coenzyme binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94567.1 | 0 | 1 | 192 | 12 | 203 | unknown [Populus trichocarpa] |
| RefSeq | XP_002283286.1 | 0 | 1 | 192 | 12 | 203 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316953.1 | 0 | 1 | 192 | 12 | 203 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002319258.1 | 0 | 1 | 192 | 12 | 203 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534445.1 | 0 | 1 | 192 | 12 | 203 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 1 | 190 | 10 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 1 | 190 | 10 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 1 | 190 | 11 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 1 | 190 | 11 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 1 | 190 | 11 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV281836 | 193 | 1 | 193 | 0 |
| CV273811 | 193 | 1 | 193 | 0 |
| CV234613 | 193 | 1 | 193 | 0 |
| DV466138 | 193 | 1 | 193 | 0 |
| DT518642 | 193 | 1 | 193 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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