Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G135000.1 |
Family | CE8 |
Protein Properties | Length: 551 Molecular Weight: 59809.6 Isoelectric Point: 6.5113 |
Chromosome | Chromosome/Scaffold: 11 Start: 15897442 End: 15899718 |
Description | methylesterase PCR A |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 239 | 535 | 0 |
NVVVAQDGSGDNTTIQESVNSVPDKSKSRYVIYVKSGIYKENVEVGKKKKNVMIVGDGMDSTILTGNLNVVDGSTTFRSATLAVAGDGFVLQDIWIQNTA GPEKHQAVALRVSADQSVINRCRIDAYQDTLYTHNYRQFYRDCFIIGTIDFIFGNGAVVLQNCHIISRKPMANQKNMVTAQGRIDPNQNTGISIQNCDIV ASSDLESEQNKFPTYLGRPWKEYSRTVVMQSNIGGHIDPTGWAEWDKEFALTTLYYGEYANRGLGAGVSKRVNWPGYHVITDPNEAKQFTVAELIQG |
Full Sequence |
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Protein Sequence Length: 551 Download |
MASSTHQPLL NTTNNTKSHV KILIFAISLF AVIFSSVFLA SRLIKVSQSS PSTPQICNQA 60 RDPQECLSIL SEAVSTEGVQ ESNGVGLLKT FLVKSLSQMR MAKAAANAVN SKINGHKHQA 120 ALADCVELMD MSIDRVTDTL SALANWGSQS DASDANTWLS GVLTNHVTCL DGIDTIDQPS 180 MKKLLQDLIS RMRTSLAAVS SLSASDTDLV QPLNGGFPSW ILGRDRKLLE SSVSTVEANV 240 VVAQDGSGDN TTIQESVNSV PDKSKSRYVI YVKSGIYKEN VEVGKKKKNV MIVGDGMDST 300 ILTGNLNVVD GSTTFRSATL AVAGDGFVLQ DIWIQNTAGP EKHQAVALRV SADQSVINRC 360 RIDAYQDTLY THNYRQFYRD CFIIGTIDFI FGNGAVVLQN CHIISRKPMA NQKNMVTAQG 420 RIDPNQNTGI SIQNCDIVAS SDLESEQNKF PTYLGRPWKE YSRTVVMQSN IGGHIDPTGW 480 AEWDKEFALT TLYYGEYANR GLGAGVSKRV NWPGYHVITD PNEAKQFTVA ELIQGGAWLG 540 STGVSFTEGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 1.0e-158 | 119 | 550 | 450 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 5.0e-161 | 22 | 550 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 7.0e-167 | 14 | 550 | 564 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 3 | 550 | 550 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 239 | 535 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF23891.1 | 0 | 56 | 550 | 38 | 528 | pectin methyl esterase [Solanum tuberosum] |
RefSeq | XP_002266980.1 | 0 | 79 | 550 | 58 | 528 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317208.1 | 0 | 3 | 550 | 2 | 549 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518523.1 | 0 | 52 | 550 | 47 | 547 | Pectinesterase precursor, putative [Ricinus communis] |
RefSeq | XP_002522859.1 | 0 | 1 | 550 | 1 | 553 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 238 | 550 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 234 | 550 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-19 | 239 | 508 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-19 | 239 | 508 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-19 | 239 | 508 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |