Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G152200.1 |
Family | GT5 |
Protein Properties | Length: 611 Molecular Weight: 67114.5 Isoelectric Point: 8.3197 |
Chromosome | Chromosome/Scaffold: 11 Start: 17070773 End: 17075387 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 86 | 581 | 0 |
VVFVGIEVAPWSKTGGLGDVIGGLPPEMAARGHRVMTISPRFDQYRDAWDTCLSAQIKVGDRIETVRYFHCYKRGVDRVFVDHPMFLEKVWGKTGSKIYG PTAGEDYQDNQLRFSLFCLAALEAPRVLSLNSSKHFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGLFMNAKVAFCIHNIAYQGRFAFSDFSLLNLPD RFKSSFDFMDLYDKPVKGRKLNWLKAGILEAQMVFTVSPYYAQELVSGIEKGMELDHCIRKTGITGIINGMDVQEWNPATDKYTSIKYDITTVSYAKPLL KEALQAEVGLPVDGDIPVIGFIGRLEEQKGSDILASAIPMLVKYNVQIIVLGTGKKYMEKQIAELEKKYPDKVRGVALFNVPLAHMIIAGADFMIIPSRF EPCGLIQLHAMRYGTVCIVASTGGLVDTVKEGYTGFHMGAFSVECDAVDPADVAAVVKTVVRALAVYGTAAFREMIKNCMSQDLSWKGPARLWEKM |
Full Sequence |
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Protein Sequence Length: 611 Download |
MATVTASHVV SNSSNVSSHG SETKASLGQI GLRSQSMTHS GLRSLNMTDK LQMRTQAFAR 60 KSVKKAYATW NHTSGKIVCL QGGMTVVFVG IEVAPWSKTG GLGDVIGGLP PEMAARGHRV 120 MTISPRFDQY RDAWDTCLSA QIKVGDRIET VRYFHCYKRG VDRVFVDHPM FLEKVWGKTG 180 SKIYGPTAGE DYQDNQLRFS LFCLAALEAP RVLSLNSSKH FSGPYGEDVV FVANDWHTAL 240 LPCYLKSMYQ SRGLFMNAKV AFCIHNIAYQ GRFAFSDFSL LNLPDRFKSS FDFMDLYDKP 300 VKGRKLNWLK AGILEAQMVF TVSPYYAQEL VSGIEKGMEL DHCIRKTGIT GIINGMDVQE 360 WNPATDKYTS IKYDITTVSY AKPLLKEALQ AEVGLPVDGD IPVIGFIGRL EEQKGSDILA 420 SAIPMLVKYN VQIIVLGTGK KYMEKQIAEL EKKYPDKVRG VALFNVPLAH MIIAGADFMI 480 IPSRFEPCGL IQLHAMRYGT VCIVASTGGL VDTVKEGYTG FHMGAFSVEC DAVDPADVAA 540 VVKTVVRALA VYGTAAFREM IKNCMSQDLS WKGPARLWEK MLLSLNVAGS EAGSEGDEIA 600 PLAKENVATP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 7.0e-81 | 84 | 585 | 520 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 2.0e-107 | 84 | 575 | 508 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-133 | 84 | 581 | 508 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 1.0e-171 | 84 | 585 | 508 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-175 | 86 | 582 | 509 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ11735.1 | 0 | 1 | 610 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACJ11751.1 | 0 | 1 | 610 | 1 | 609 | granule bound starch synthase [Gossypium hirsutum] |
GenBank | ACV72639.1 | 0 | 1 | 610 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
RefSeq | XP_002300507.1 | 0 | 1 | 610 | 1 | 610 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317054.1 | 0 | 1 | 610 | 1 | 585 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 84 | 610 | 10 | 536 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3vue_A | 0 | 84 | 610 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 84 | 586 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1rzv_B | 0 | 84 | 585 | 1 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0 | 84 | 585 | 1 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 591 | 22 | 611 | 0 |
HO629148 | 583 | 31 | 611 | 0 |
HO825853 | 518 | 92 | 609 | 0 |
CN831271 | 382 | 230 | 611 | 0 |
HO778340 | 379 | 75 | 451 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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