y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.011G152400.2 |
Family | GH17 |
Protein Properties | Length: 365 Molecular Weight: 39703.5 Isoelectric Point: 7.8318 |
Chromosome | Chromosome/Scaffold: 11 Start: 17078879 End: 17080840 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 344 | 0 |
IGINYGQIANNLPAPDNVVPLVKSIGATKVKLYDADPRVLKAFANTGVEFIVGLGNEYLSKMRDPEKAQAWVKTNVQAYLPATKITCITIGNEVLTFNDT GLTDNLIPAMQNIHTALVNLGLDKQVSVTTAHSLAILEVSYPPSAGSFRKDLVGCITPILNFHAKTNSPFLINAYPFFAYKSNPKQISLDFVLFQPNQGI VDSKSNFHYDNMLFAQIDAVHSALASLGYSKLPVHISETGWPSKGDADEVGATLENAKKYNGNLLKIICQRKGTPMRPNTDFNIYVFALFNENMKPGPAS ERNYGLFKPDGTPAYSL |
Full Sequence |
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Protein Sequence Length: 365 Download |
MEYCRFYYCA SLILSISGLV FPVMVGSIGI NYGQIANNLP APDNVVPLVK SIGATKVKLY 60 DADPRVLKAF ANTGVEFIVG LGNEYLSKMR DPEKAQAWVK TNVQAYLPAT KITCITIGNE 120 VLTFNDTGLT DNLIPAMQNI HTALVNLGLD KQVSVTTAHS LAILEVSYPP SAGSFRKDLV 180 GCITPILNFH AKTNSPFLIN AYPFFAYKSN PKQISLDFVL FQPNQGIVDS KSNFHYDNML 240 FAQIDAVHSA LASLGYSKLP VHISETGWPS KGDADEVGAT LENAKKYNGN LLKIICQRKG 300 TPMRPNTDFN IYVFALFNEN MKPGPASERN YGLFKPDGTP AYSLGISGTD AQAIQSNCFQ 360 PGHV* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-8 | 56 | 337 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-98 | 28 | 344 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PIR | 0 | 22 | 351 | 26 | 355 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
RefSeq | XP_002278950.1 | 0 | 34 | 363 | 33 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 17 | 346 | 4 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317055.1 | 0 | 24 | 364 | 1 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 356 | 1 | 354 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |