CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.011G164700.1
FamilyCBM57
Protein PropertiesLength: 837 Molecular Weight: 92746.1 Isoelectric Point: 6.721
ChromosomeChromosome/Scaffold: 11 Start: 18148007 End: 18150540
Descriptionhercules receptor kinase 2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM572263805.7e-21
  YRLNIGGQEIKTNQDSDLWRKWEMDSSYMITADAGVEIRNTSNVTYASNNDSSVAPLLVYETARIMSNTEVLEKKFNMSWKFEVDPDFDYLIRLHFCELV
  YDKANQRIFRVYINNKTAADSFDVYVRAGGKNIAYHQDYFDTVSSKTNTLWVQLG
Full Sequence
Protein Sequence     Length: 837     Download
MEKVQGRGIW GLVFLIMVFL SVSSREAQSK PVLVNCGANS SVNVDGRRWI GDLAPNDNFT    60
VSSPGVAATD SNADGNSTLG PLYKTARIFN ALNYTFAGMQ GNYFLRLHFC PFPFENYNVN    120
ESSFSVVANG LKLMTEFNVP VEISDKNLHL QNSNSNSSSL SLVKEYILTI NDVLVVEFVS    180
SRGSFGFINA IEVVPVVGTL FADSVSKVGG SNANFNVSGR GIETMYRLNI GGQEIKTNQD    240
SDLWRKWEMD SSYMITADAG VEIRNTSNVT YASNNDSSVA PLLVYETARI MSNTEVLEKK    300
FNMSWKFEVD PDFDYLIRLH FCELVYDKAN QRIFRVYINN KTAADSFDVY VRAGGKNIAY    360
HQDYFDTVSS KTNTLWVQLG PDTAVGASGT DALLNGLEIF KLSRSANLAY ADRIDSTEKS    420
GSHSKSWILW LGVGAGVASV LIIAITFTCI FCFGKNRRKQ MSDAKDNPPG WRPLFMHGAV    480
VSSIANNKGG VRSLNGSLAA STRVGRRFTL SEIRAATNNF DDSLVIGVGG FGKVYSGKIE    540
DGTLAAIKRS NPQSKQGLTE FETEIEMLSK LRHRHLVSLI GFCEEQNEMI LVYEYMANGT    600
LRSHLFGSDF PPLTWKQRLE ACIGAARGLH YLHTGADRGI IHRDIKTTNI LLDENFVAKM    660
ADFGLSKAGP ALDHTHVSTA VKGSFGYLDP EYYRRQQLTE KSDVYSFGVV LFEVVCSRPV    720
INPSLPKDQI NLAEWAMKWQ RQKSLETIVD PRLRGNTCPE SLKKFGEIAE KCLADEGKNR    780
PTMGEVLWHL EFVLQLHEAW MRANATTETS ITSSQALEDL ELRVAEEARR PPLALE*       840
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00180PKc1.0e-50526713192+
smart00219TyrKc4.0e-51525790274+
cd00192PTKc5.0e-52525791283+
smart00221STYKc3.0e-52525790277+
pfam12819Malectin_like6.0e-6034402383+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI31024.1098213813unnamed protein product [Vitis vinifera]
RefSeqXP_002264211.10182140858PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299052.1018361830predicted protein [Populus trichocarpa]
RefSeqXP_002330599.1018361836predicted protein [Populus trichocarpa]
RefSeqXP_002523186.1018291826kinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2qkw_B049379911319A Chain A, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto
PDB3hgk_D049379911319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_C049379911319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_B049379911319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_A049379911319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
Transmembrane Domains
StartEnd
724
429451
Signal Peptide
Cleavage Site
29
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8051853384557860
EX3576022575307860
DY9713293004977960
GT0502173255058290
HO7987985022717500
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_026_00352.1
Brassica rapaBra032404
Citrus clementinaCiclev10014250m
Citrus sinensisorange1.1g047215m
Eucalyptus grandisEucgr.K01945.1
Fragaria vescamrna28878.1-v1.0-hybrid
Malus domesticaMDP0000843097
Manihot esculentacassava4.1_030005m
Panicum virgatumPavirv00014838m
Populus trichocarpaPotri.001G467000.1
Setaria italicaSi028931m
Vitis viniferaGSVIVT01021662001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny