Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G037300.1 |
Family | GT77 |
Protein Properties | Length: 357 Molecular Weight: 40808.7 Isoelectric Point: 7.2805 |
Chromosome | Chromosome/Scaffold: 12 Start: 3325315 End: 3329687 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 126 | 323 | 0 |
VNNLIIISMDQKAHARCLAIHPHCYALRTEGLNFSSEAYFMSEEYLKMMWRRIEFLGTVLEMGYSFVFTDADIVWLRNPFPRFYPKVDFQIACDNYYGNP EDKNNRPNGGFTYVRSNLRTIQFYRFWFQSRETYPGNHDQDVLNMIKNDPFLEKIRLEMRFLDTAYFGGFCERSKDFHEVCTMHANCCYGLGTKVHDL |
Full Sequence |
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Protein Sequence Length: 357 Download |
MTGTGGDGMV NGTLHSSSAV IHKPIVRITV LFLGVLAVSC IVLYKSAYHF EFLPGSSSDS 60 DSLSMLDNRT SKGKFDLELE GILKNASTKH KTVILTTLNQ AWAEPGSIFD LFLESFQVGD 120 NTQKLVNNLI IISMDQKAHA RCLAIHPHCY ALRTEGLNFS SEAYFMSEEY LKMMWRRIEF 180 LGTVLEMGYS FVFTDADIVW LRNPFPRFYP KVDFQIACDN YYGNPEDKNN RPNGGFTYVR 240 SNLRTIQFYR FWFQSRETYP GNHDQDVLNM IKNDPFLEKI RLEMRFLDTA YFGGFCERSK 300 DFHEVCTMHA NCCYGLGTKV HDLKIVLEDW KNFMSLPLKE KASASPAWRA PQNCRT* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 4.0e-77 | 124 | 323 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002270793.1 | 0 | 16 | 355 | 12 | 336 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315829.1 | 0 | 16 | 354 | 35 | 383 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318336.1 | 0 | 26 | 354 | 1 | 329 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329694.1 | 0 | 1 | 356 | 1 | 357 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521882.1 | 0 | 30 | 354 | 49 | 375 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV234649 | 274 | 1 | 274 | 0 |
DT508951 | 238 | 120 | 357 | 0 |
DT513559 | 258 | 1 | 256 | 0 |
DT519839 | 214 | 144 | 357 | 0 |
EX272476 | 326 | 18 | 343 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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