Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G048900.1 |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 64456.9 Isoelectric Point: 9.6398 |
Chromosome | Chromosome/Scaffold: 12 Start: 4604288 End: 4606650 |
Description | laccase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 565 | 0 |
ATRRFQFNVEWKKVTRLCTTKQLLTVNGQYPGPTIAVHEGDRVEIKVKNRIAHNTTLHWHGLRQLRTGWADGPAYITQCPIRGGQSYTYKFTVIKQRGTL LWHAHYAWQRASVYGALIIYPRMPYPFSAQIQAEIPIILGEWWNGDPDEVEKIMMLTGAGPDSSNAYTINGMPGPLYPCSNRDTFIQTVEYGRTYMLRII NAALANELFFAIAKHKLTVVEVDAVYTKPFTTTSIMIAPGQTTTVLMTANQVPDSTGMFAMAARPYLTSVFPSNNSTTISFLRYKNARNRRGKPPSNLSS LKLYNLPAMEDTAFATKFSGNIKSLASPKYPCDVPKTIDKRVITTISLNLQDCPAKKTCLGFRGKKFFASMNNQSFVRPSISILESYYKNLTTTSFSSDF PEKPPNAFDYTGGDPLSQNMNTEFGTKLIVVPYGTNLEIVLQDTSFLNLENHPIHVHGHNFFIVGSGFGNFNKAKDPKRYNLVDPPERNTVAVPSGGWAA IRIKADNPGVWFIHCHLEQHTSWGLAAGFIVQNGQEP |
Full Sequence |
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Protein Sequence Length: 580 Download |
MEGGHKNSGI LLVSLVIIAG ALPFCSSQAT RRFQFNVEWK KVTRLCTTKQ LLTVNGQYPG 60 PTIAVHEGDR VEIKVKNRIA HNTTLHWHGL RQLRTGWADG PAYITQCPIR GGQSYTYKFT 120 VIKQRGTLLW HAHYAWQRAS VYGALIIYPR MPYPFSAQIQ AEIPIILGEW WNGDPDEVEK 180 IMMLTGAGPD SSNAYTINGM PGPLYPCSNR DTFIQTVEYG RTYMLRIINA ALANELFFAI 240 AKHKLTVVEV DAVYTKPFTT TSIMIAPGQT TTVLMTANQV PDSTGMFAMA ARPYLTSVFP 300 SNNSTTISFL RYKNARNRRG KPPSNLSSLK LYNLPAMEDT AFATKFSGNI KSLASPKYPC 360 DVPKTIDKRV ITTISLNLQD CPAKKTCLGF RGKKFFASMN NQSFVRPSIS ILESYYKNLT 420 TTSFSSDFPE KPPNAFDYTG GDPLSQNMNT EFGTKLIVVP YGTNLEIVLQ DTSFLNLENH 480 PIHVHGHNFF IVGSGFGNFN KAKDPKRYNL VDPPERNTVA VPSGGWAAIR IKADNPGVWF 540 IHCHLEQHTS WGLAAGFIVQ NGQEPSQRLL PPPQDLPSC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 1.0e-79 | 15 | 558 | 572 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 9.0e-86 | 11 | 566 | 594 | + oxidoreductase | ||
TIGR03388 | ascorbase | 4.0e-99 | 30 | 557 | 557 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 579 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74557.1 | 0 | 1 | 579 | 1 | 576 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_173252.2 | 0 | 6 | 579 | 2 | 581 | LAC1 (Laccase 1); laccase [Arabidopsis thaliana] |
RefSeq | XP_002281603.1 | 0 | 1 | 579 | 1 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317883.1 | 0 | 1 | 579 | 1 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322091.1 | 0 | 1 | 579 | 1 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 569 | 4 | 531 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asq_A | 0 | 31 | 569 | 4 | 531 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_B | 0 | 31 | 569 | 4 | 531 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_A | 0 | 31 | 569 | 4 | 531 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1aso_B | 0 | 31 | 569 | 4 | 531 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |