| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.012G053600.1 |
| Family | GT28 |
| Protein Properties | Length: 443 Molecular Weight: 48096.4 Isoelectric Point: 7.0424 |
| Chromosome | Chromosome/Scaffold: 12 Start: 5420591 End: 5425395 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT28 | 263 | 423 | 0 |
| ILVLGGSLGANAINIALLNVYSQMLLEHKDWYIIWQTGVESYNEMESLVRNHSNLVLKPFLHSMDLAYAAADLIVSRAGAMTCSEILATGKSAILIPSPD VAEGHQFKNASLMADVAGTRVITEDELDSTTLGTAIEEILDDDALRAEMSERALRAAKPDA | |||
| Full Sequence |
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| Protein Sequence Length: 443 Download |
| MATIPHHHLH QLAFIPSCPS SSSSSSSPSL LSLSTKHRSF KILCCLSIKE STNDHQITPQ 60 EPRTPTKNNL RVVLAAGGTG GHIIPAVAIA DELRVSNPNI EILFIGTPNS MESTSIPSAG 120 YPFTSIPPVK LFRPLVSLEN LTLPIHLIHS IIHSFKLLKE FDPHVVIGTG GYVSFPTCLA 180 ALLQRTKIVI HEQNSVPGIA NYVLSYFSHL VFLSYNSTIE CFPKKHNCVV TGNPVRVSLR 240 QFVSRAVARL EFFPMAGEEA KVILVLGGSL GANAINIALL NVYSQMLLEH KDWYIIWQTG 300 VESYNEMESL VRNHSNLVLK PFLHSMDLAY AAADLIVSRA GAMTCSEILA TGKSAILIPS 360 PDVAEGHQFK NASLMADVAG TRVITEDELD STTLGTAIEE ILDDDALRAE MSERALRAAK 420 PDASAQIAQH ILSLVESSTK RK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04101 | Glyco_tran_28_C | 2.0e-36 | 262 | 427 | 167 | + Glycosyltransferase family 28 C-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. | ||
| COG0707 | MurG | 1.0e-94 | 71 | 437 | 367 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| TIGR01133 | murG | 2.0e-96 | 71 | 431 | 362 | + undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| PRK00726 | murG | 2.0e-123 | 71 | 437 | 367 | + undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | ||
| cd03785 | GT1_MurG | 2.0e-134 | 71 | 430 | 361 | + MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI15500.1 | 0 | 28 | 442 | 25 | 436 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_177515.1 | 0 | 28 | 440 | 21 | 431 | glycosyl transferase family 28 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277203.1 | 0 | 40 | 442 | 32 | 431 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002317900.1 | 0 | 39 | 440 | 1 | 402 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524882.1 | 0 | 28 | 442 | 26 | 437 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2u_A | 0 | 72 | 437 | 5 | 357 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1nlm_B | 4e-37 | 71 | 431 | 8 | 350 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1nlm_A | 4e-37 | 71 | 431 | 8 | 350 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
| PDB | 1f0k_B | 4e-37 | 71 | 431 | 8 | 350 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 1f0k_A | 4e-37 | 71 | 431 | 8 | 350 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES821435 | 358 | 66 | 416 | 0 |
| DT477381 | 241 | 1 | 238 | 0 |
| CO115843 | 274 | 157 | 424 | 0 |
| DW243293 | 285 | 80 | 358 | 0 |
| ES821129 | 280 | 81 | 354 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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