y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G065700.1 |
Family | CBM43 |
Protein Properties | Length: 171 Molecular Weight: 18637.6 Isoelectric Point: 6.9213 |
Chromosome | Chromosome/Scaffold: 12 Start: 8573720 End: 8574616 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 83 | 163 | 2e-30 |
WCVCKEMSDSVLQQTLDYACGAGADCGPVHQNGACFQPNTVRAHCNYAVNSYFQRKGQAQGTCDFKGTATVSASDPSINGC |
Full Sequence |
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Protein Sequence Length: 171 Download |
MALLVLAMLM LAMTGRATCC AFFVSCSSPS LTVLQMESVF LLSFFLSLNQ MLLHFCDFSQ 60 MANWIQMFHS FHCVILLWLG CTWCVCKEMS DSVLQQTLDY ACGAGADCGP VHQNGACFQP 120 NTVRAHCNYA VNSYFQRKGQ AQGTCDFKGT ATVSASDPSI NGCSYPSSVR * 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-18 | 82 | 152 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 82 | 165 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92735.1 | 0 | 81 | 169 | 19 | 107 | unknown [Populus trichocarpa] |
GenBank | ABK93473.1 | 0 | 81 | 169 | 19 | 107 | unknown [Populus trichocarpa] |
RefSeq | XP_002317963.1 | 0 | 81 | 170 | 19 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328640.1 | 0 | 81 | 170 | 19 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514663.1 | 0 | 81 | 170 | 19 | 108 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-22 | 82 | 167 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |