y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.012G114800.1 |
Family | GT77 |
Protein Properties | Length: 267 Molecular Weight: 31098.5 Isoelectric Point: 8.5775 |
Chromosome | Chromosome/Scaffold: 12 Start: 13528229 End: 13529177 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT77 | 32 | 231 | 0 |
VDNLLLVNVDQASYERCKFLRLHCYKLETDGVKFDKEEVYMSDEFIKMMWRRTLFLGQVLRRGYNFIFTDADVLWLRNPFPRLSFNKNIDLQISTDRFNG DQWSQTNPINTGFFMIRSNKNTIQLFDLWYERKDKSTGQKEQDVLNGMLHGGVFKKLGLRVRFLDTLYFSGFCQDSKDIRAVTTVHANCCRTISAKITDL |
Full Sequence |
---|
Protein Sequence Length: 267 Download |
MVNKAFVEGD DKSMLDLFLD SFWHGENTRG LVDNLLLVNV DQASYERCKF LRLHCYKLET 60 DGVKFDKEEV YMSDEFIKMM WRRTLFLGQV LRRGYNFIFT DADVLWLRNP FPRLSFNKNI 120 DLQISTDRFN GDQWSQTNPI NTGFFMIRSN KNTIQLFDLW YERKDKSTGQ KEQDVLNGML 180 HGGVFKKLGL RVRFLDTLYF SGFCQDSKDI RAVTTVHANC CRTISAKITD LSAVIDDWKR 240 FKRSAVNETS TFGNLKHEAC AHSWGK* 300 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-59 | 43 | 231 | 196 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002270380.1 | 0 | 1 | 264 | 10 | 272 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321777.1 | 0 | 1 | 264 | 21 | 284 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002339511.1 | 0 | 1 | 264 | 12 | 275 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511046.1 | 0 | 1 | 264 | 96 | 359 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
RefSeq | XP_002526480.1 | 0 | 1 | 266 | 83 | 354 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CV092820 | 223 | 16 | 238 | 0 |
EL409403 | 245 | 1 | 242 | 0 |
GD085037 | 210 | 51 | 260 | 0 |
GD082414 | 208 | 51 | 258 | 0 |
DY907011 | 214 | 1 | 213 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|