Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G126400.1 |
Family | AA1 |
Protein Properties | Length: 594 Molecular Weight: 66195.7 Isoelectric Point: 7.1144 |
Chromosome | Chromosome/Scaffold: 12 Start: 14456179 End: 14460666 |
Description | SKU5 similar 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 50 | 518 | 0 |
KVIAINGQFPGPLVNATTNNNVVIKVYNDLDEDLLMTWPGIQMRRNSWQDGVLGTNCPIPPTWDFNYTFQVKDQIGSFFYFPSLNLQRASGGFGPFVINN RAVIQIPFAQPDGDFTLLIGDWYTRNHTALRADLDSGKDLGMPDGVLINGKGPYRYNTTLVPDGLPYETIKVDPGKTYRFRVHNVGTSTSLNFRIQGHNL LLVETEGYYTVQQNYTSFDIHVGQSSSFLVTMDQNATSDYYIVASARFVNESIWRKVSGVGILHYSNSKGPATGPLPEAPSDIYNQWSAMNQPKAIRQNT SASGARPNPQGSYHYGSINVTDTYILRSLPPTTIDGKLRATLNGISFVNPGTPIRLADLNKVKGSYKLDFPSAPLNRTFHRDTSVINATYKGFTEIILQN NDTRMQSFHMNGYSFFVVGMDWGIWSENSRGSYNKWDAISRSTVEVYPGGWTAVLASLDNAGVWNLRVE |
Full Sequence |
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Protein Sequence Length: 594 Download |
MAFFKFSSTS FFLLIHIALF SSFSLAADPT VYYDFKLSYI TVSPLGVPQK VIAINGQFPG 60 PLVNATTNNN VVIKVYNDLD EDLLMTWPGI QMRRNSWQDG VLGTNCPIPP TWDFNYTFQV 120 KDQIGSFFYF PSLNLQRASG GFGPFVINNR AVIQIPFAQP DGDFTLLIGD WYTRNHTALR 180 ADLDSGKDLG MPDGVLINGK GPYRYNTTLV PDGLPYETIK VDPGKTYRFR VHNVGTSTSL 240 NFRIQGHNLL LVETEGYYTV QQNYTSFDIH VGQSSSFLVT MDQNATSDYY IVASARFVNE 300 SIWRKVSGVG ILHYSNSKGP ATGPLPEAPS DIYNQWSAMN QPKAIRQNTS ASGARPNPQG 360 SYHYGSINVT DTYILRSLPP TTIDGKLRAT LNGISFVNPG TPIRLADLNK VKGSYKLDFP 420 SAPLNRTFHR DTSVINATYK GFTEIILQNN DTRMQSFHMN GYSFFVVGMD WGIWSENSRG 480 SYNKWDAISR STVEVYPGGW TAVLASLDNA GVWNLRVENL DRWYLGQETY MRIINPEENG 540 ETEMPPPNNV LYCGALASKQ QDLSHKSGAS ILHGNPNLFF TLLMALCAVF IFS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00044 | PLN00044 | 0 | 17 | 566 | 554 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 26 | 554 | 533 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 24 | 554 | 541 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 13 | 554 | 545 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 27 | 559 | 537 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194254.2 | 0 | 13 | 575 | 11 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_199961.1 | 0 | 19 | 590 | 16 | 588 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 1 | 593 | 1 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321832.1 | 0 | 1 | 593 | 1 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 12 | 593 | 9 | 592 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 558 | 5 | 543 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 1asq_A | 0 | 32 | 558 | 5 | 543 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 1asp_B | 0 | 32 | 558 | 5 | 543 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 1asp_A | 0 | 32 | 558 | 5 | 543 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |
PDB | 1aso_B | 0 | 32 | 558 | 5 | 543 | A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella Pneumoniae |