Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G126800.1 |
Family | CE8 |
Protein Properties | Length: 521 Molecular Weight: 57381.9 Isoelectric Point: 9.605 |
Chromosome | Chromosome/Scaffold: 12 Start: 14484844 End: 14486913 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 209 | 504 | 0 |
LVVAQDGSGNHRTIKAALDAAAKRSGSGRFVIRIKSGVYRENLDIGKNLKNIMLVGDGLKNTIITGSRSVGGGSTTFNSATVAVTGGGFIARGITFRNTA GPQNHQAVALRSGADLSVFYRCGFEGYQDTLYVHSQRQFYKECDIYGTVDFIFGNAAVVLQNCMIYARRPMDKQKNVVTAQGRTDANQNTGISIHNSRVM ASSDLRPVLSSFKTFLGRPWKEYSRTVFLQTYLDSLVDAAGWLEWDGNFALNTLYYGEYRNSGPGASTSGRVKWRGYRVITSATEASRFTVANFIA |
Full Sequence |
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Protein Sequence Length: 521 Download |
MATKLFISLL FICFCSLLSS SVASNHDHDQ IDYWCNKTPN PEPCKYFMKQ NPKHFVPQQK 60 SDFRKLAIEL SMQRAHTALS HNKGLGSKCR NEKERAAWAD CLSLYEDTIV ELNHTLDSHT 120 KCTDFDAQTW LSTALTNLET CKAGFKDFGV SDFMLPLMSN NVSKLIRNSL ALKDNASSNP 180 PQTYNDGFPS WVKPGDRKLL LASSSTSNLV VAQDGSGNHR TIKAALDAAA KRSGSGRFVI 240 RIKSGVYREN LDIGKNLKNI MLVGDGLKNT IITGSRSVGG GSTTFNSATV AVTGGGFIAR 300 GITFRNTAGP QNHQAVALRS GADLSVFYRC GFEGYQDTLY VHSQRQFYKE CDIYGTVDFI 360 FGNAAVVLQN CMIYARRPMD KQKNVVTAQG RTDANQNTGI SIHNSRVMAS SDLRPVLSSF 420 KTFLGRPWKE YSRTVFLQTY LDSLVDAAGW LEWDGNFALN TLYYGEYRNS GPGASTSGRV 480 KWRGYRVITS ATEASRFTVA NFIAGRSWLP ATGVPFSSGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 2.0e-163 | 35 | 520 | 533 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 4.0e-167 | 31 | 520 | 513 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 0 | 31 | 520 | 505 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 208 | 505 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 93 | 520 | 441 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265104.1 | 0 | 32 | 520 | 5 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280446.1 | 0 | 11 | 520 | 5 | 513 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318285.1 | 0 | 1 | 520 | 1 | 520 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322401.1 | 0 | 1 | 520 | 1 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510940.1 | 0 | 66 | 520 | 1 | 455 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 202 | 520 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 207 | 520 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-28 | 204 | 510 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-28 | 204 | 510 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-28 | 204 | 510 | 1 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |