Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G126900.1 |
Family | CE8 |
Protein Properties | Length: 534 Molecular Weight: 59721.1 Isoelectric Point: 10.3696 |
Chromosome | Chromosome/Scaffold: 12 Start: 14493123 End: 14495502 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 220 | 517 | 0 |
LVVSKSGLGNFRTIQAAIDAASKRIFRTRFIIYVKRGVYRENIVVRVNSNNIWLVGDGLRDTIITSSRSVGAGYTTYSSATAGIDGLRFVARGITFINTA GPLKGQAVALRSASDLSVFYRCSIQGYQDTLFVHSQRQFYRECYIFGTIDFIFGNAAVVFQNSIIYVRRPLKGQANMITAQGRNDPFQNTGISIHNSRIL PAPDLKPVVGAFETYLGRPWMQYSRTVILRTYIDSFINPSGWSPWLRTSNFAQDTLYYGEYKNFGPGSSTKRRVAWKGYHVITSPGVASRFTVRNLIA |
Full Sequence |
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Protein Sequence Length: 534 Download |
MKRNTIMSAK VRLFATLMFF SSMLSFAASK STEANITWWC NHTPHPSTCM YHMSHSHHHF 60 SLKHRSQFRI MSIQLALESA LIAQGQVSQF EQNCENQNQR AVWSDCLKLH SNTILQLNRT 120 LIGLEKKRLP CTDLDAQTWL STALTNIQTC RTGSLDLNVT DFTMPAASKN LSELISNTLA 180 INGVSLATED NNTQGYFPSW FSGQNRRLLQ STSIAAKANL VVSKSGLGNF RTIQAAIDAA 240 SKRIFRTRFI IYVKRGVYRE NIVVRVNSNN IWLVGDGLRD TIITSSRSVG AGYTTYSSAT 300 AGIDGLRFVA RGITFINTAG PLKGQAVALR SASDLSVFYR CSIQGYQDTL FVHSQRQFYR 360 ECYIFGTIDF IFGNAAVVFQ NSIIYVRRPL KGQANMITAQ GRNDPFQNTG ISIHNSRILP 420 APDLKPVVGA FETYLGRPWM QYSRTVILRT YIDSFINPSG WSPWLRTSNF AQDTLYYGEY 480 KNFGPGSSTK RRVAWKGYHV ITSPGVASRF TVRNLIAGDS WLPATKVPFT SDL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 6.0e-147 | 100 | 533 | 453 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 4.0e-150 | 30 | 533 | 516 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-153 | 100 | 533 | 440 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-170 | 219 | 519 | 301 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 0 | 35 | 533 | 508 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_190324.1 | 0 | 31 | 533 | 79 | 594 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264861.1 | 0 | 1 | 533 | 2 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002318284.1 | 0 | 7 | 533 | 1 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322402.1 | 0 | 7 | 533 | 1 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 32 | 533 | 27 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 219 | 533 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 218 | 533 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-19 | 215 | 491 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-19 | 215 | 491 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-19 | 215 | 491 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |