Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.012G130700.1 |
Family | GT47 |
Protein Properties | Length: 611 Molecular Weight: 70543.6 Isoelectric Point: 8.9024 |
Chromosome | Chromosome/Scaffold: 12 Start: 14743865 End: 14746532 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 212 | 552 | 0 |
FGEIFVYDLPSALNHEVVNNCDELNPWSSSCDALSNNGFGPVAAAISSVVPENLAAAWYWTDQFVTEVLFHNRILNHKCRTKDPNNATAFYIPFYVGLAV GKFLWLKNSSAKERDFHCEMMLKWVQDQPYFTRNDGWDHFLTMGRISWDFRRSKDEEWGSSCIHKPGMRNVTRLLIERNPWDYFDVGVPYPTGFHPRSDN DVVEWQEFVRNRNRKSLFCFAGAKRSKIKDDFRGLLLNHCRNESDSCRVVDCAGSKCSNGTSIILETFLDSVFCLQPRGDSFTRRSIFDCMIAGSIPVLF WKRTAYDQYEWFLPAEPESYSVFIDRNEVKNGTASIRKVLE |
Full Sequence |
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Protein Sequence Length: 611 Download |
MKTKIKLKFG QWRQIRGVPV DDEASVFHVL VAQLLNLLTV PSVTFFNQRS YLTRAHPQPP 60 LSLRDITNIK NTTPLDTLFH LSSPPPFFPA SRKSKILRMF PLSNPSSSPE SQIKKPKTPL 120 DVRRKDSFKS PKAFLAAHYP SINQPRLCLF LSIFFIQILL LLALRSIPRS FHHRLHHFPA 180 PVTAHHHLTP ILTTTTASFS ASTVKEENSC EFGEIFVYDL PSALNHEVVN NCDELNPWSS 240 SCDALSNNGF GPVAAAISSV VPENLAAAWY WTDQFVTEVL FHNRILNHKC RTKDPNNATA 300 FYIPFYVGLA VGKFLWLKNS SAKERDFHCE MMLKWVQDQP YFTRNDGWDH FLTMGRISWD 360 FRRSKDEEWG SSCIHKPGMR NVTRLLIERN PWDYFDVGVP YPTGFHPRSD NDVVEWQEFV 420 RNRNRKSLFC FAGAKRSKIK DDFRGLLLNH CRNESDSCRV VDCAGSKCSN GTSIILETFL 480 DSVFCLQPRG DSFTRRSIFD CMIAGSIPVL FWKRTAYDQY EWFLPAEPES YSVFIDRNEV 540 KNGTASIRKV LERYSEDEIR RMRERVIEYI PKFLYARPDE GLETIKDAFD VAIDAVLRRF 600 KEQEQPGYRW * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-52 | 209 | 554 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 99 | 610 | 1 | 516 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 99 | 610 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 99 | 610 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 99 | 610 | 2 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 99 | 610 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |