| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.013G013400.1 |
| Family | CE8 |
| Protein Properties | Length: 578 Molecular Weight: 64107.6 Isoelectric Point: 9.5518 |
| Chromosome | Chromosome/Scaffold: 13 Start: 866397 End: 868233 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 264 | 558 | 0 |
| DIVVAKDGSGDFSTIREALKHVPIKSKKAFVLHIKAGVYQEYLEISKGMINLVVIGDGKENTRIIGNKNFVDGINTFHTATVAVLGDNFVAKNIGFENNA GAIKHQAVALRVSADYAIFYNCSMDGHQDTLYTHAKRQFYRDCSISGTIDFVFGDASAVFQNCKFLVRKPLENQQCIVTAQGRKMRRQPSALIIQSSTIT AHPDLFPERKQFKSYLGRPWKEYSRTIIMESFIDDLIQPEGWLPWLGTFGLKTCWYTEFNNYGPGSSKNLRVKWNGIKTINRQHAMDFTPGRFLK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MSYGDDSKRK RRLAIIGVSS MLLVAMVVAV TVGVGLNNDG NDGLNGSSHK STSQVSASVK 60 AVKAICQPTD YRKTCEESLQ KAAGNTTDPK ELIKIAFKIA EKQINEASEK SKLLEELSKD 120 PRTRGALQSC KELMNMSVGE LKQSLDKVTD FDLSELEKMM ADVKTWLSAS ITYQETCLDG 180 FENTTTDAGK KMKKGMKLGM ELSANLLDIV SGISSAIPSL ESFTHRRLLQ DDLPVLGHGD 240 QFPTWTDFGT RRLLAAPVSK IKADIVVAKD GSGDFSTIRE ALKHVPIKSK KAFVLHIKAG 300 VYQEYLEISK GMINLVVIGD GKENTRIIGN KNFVDGINTF HTATVAVLGD NFVAKNIGFE 360 NNAGAIKHQA VALRVSADYA IFYNCSMDGH QDTLYTHAKR QFYRDCSISG TIDFVFGDAS 420 AVFQNCKFLV RKPLENQQCI VTAQGRKMRR QPSALIIQSS TITAHPDLFP ERKQFKSYLG 480 RPWKEYSRTI IMESFIDDLI QPEGWLPWLG TFGLKTCWYT EFNNYGPGSS KNLRVKWNGI 540 KTINRQHAMD FTPGRFLKGD SWIKATGIPY TPFLVRK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 2.0e-159 | 47 | 574 | 531 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 0 | 1 | 574 | 581 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 0 | 47 | 571 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 0 | 50 | 569 | 530 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 264 | 560 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39537.1 | 0 | 54 | 574 | 51 | 574 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279123.1 | 0 | 54 | 570 | 51 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318979.1 | 0 | 1 | 577 | 1 | 577 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330222.1 | 0 | 1 | 577 | 1 | 578 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512459.1 | 0 | 1 | 576 | 1 | 581 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 259 | 571 | 3 | 316 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 261 | 570 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-22 | 275 | 530 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-22 | 275 | 530 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-22 | 275 | 530 | 18 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
