| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.013G051400.6 |
| Family | GT41 |
| Protein Properties | Length: 742 Molecular Weight: 83638 Isoelectric Point: 7.5029 |
| Chromosome | Chromosome/Scaffold: 13 Start: 3774795 End: 3781878 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 224 | 512 | 0 |
| RPNMAEAHANLASAYKDSGHVEAAIKSYRKALLLRTDFPEATCNLLHTLQCVCCWEDRDKMFNEVEGIIRRQISMAVLPSVQPFHAIAYPIDPVLALEIS RKYAAHCSIIASRFALPPFKHPAPLAVKHERGSGRLRIGYVSSDFGNHPLSHLMGSVFGMHNRENVEVFCYALSPNDGTEWRQRTQFEAEHFIDVSAMTS DMIAKLINEDKIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGATYIDYLVTDEFVSPTRFSHIYSEKLVHLPHCYFVNDYKQ | |||
| GT41 | 524 | 724 | 0 |
| HKRSDYGLPEDKFIFACFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEMRLRAYAVAQGVQPDQIIFTDVAMKQEHIRRSALADLFLDTPLCNA HTTGTDILWAGLPMVTMPLEKMATRVAGSLCLATGLGDEMIVSSMKEYEERAVSLALNRPKLQSLTNRLKAARMTCPLFDTRRWVRNLDRAYFKMWSIHC S | |||
| Full Sequence |
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| Protein Sequence Length: 742 Download |
| MESGDLNRAL QYYKEAVKLK PKFPDAYLNL GNVYKALGMP QEAIVCYQQA VQARPKYAMA 60 FGNLASTYYE RGQLDLAILH YKQAIACDQR FLEAYNNLGN ALKDVGRVDE AIQCYNQCLS 120 LQPNHPQALT NLGNIYMEWN MSAAAASCYK ATLAVTTGLS APFSNLAVIY KQQGNYSDAI 180 SCYNEVLRIE PLAADGLVNR GNTYKEIGRV SEAIQDYINA ITIRPNMAEA HANLASAYKD 240 SGHVEAAIKS YRKALLLRTD FPEATCNLLH TLQCVCCWED RDKMFNEVEG IIRRQISMAV 300 LPSVQPFHAI AYPIDPVLAL EISRKYAAHC SIIASRFALP PFKHPAPLAV KHERGSGRLR 360 IGYVSSDFGN HPLSHLMGSV FGMHNRENVE VFCYALSPND GTEWRQRTQF EAEHFIDVSA 420 MTSDMIAKLI NEDKIQILIN LNGYTKGARN EIFAMQPAPI QVSYMGFPGT TGATYIDYLV 480 TDEFVSPTRF SHIYSEKLVH LPHCYFVNDY KQKNLDVLDP TCQHKRSDYG LPEDKFIFAC 540 FNQLYKMDPE IFNTWCNILK RVPNSALWLL RFPAAGEMRL RAYAVAQGVQ PDQIIFTDVA 600 MKQEHIRRSA LADLFLDTPL CNAHTTGTDI LWAGLPMVTM PLEKMATRVA GSLCLATGLG 660 DEMIVSSMKE YEERAVSLAL NRPKLQSLTN RLKAARMTCP LFDTRRWVRN LDRAYFKMWS 720 IHCSGQQPHH FKVAENDFDF P* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02917 | PEP_TPR_lipo | 2.0e-22 | 1 | 264 | 298 | + putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | ||
| pfam13844 | Glyco_transf_41 | 2.0e-72 | 359 | 512 | 155 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| pfam13844 | Glyco_transf_41 | 7.0e-77 | 526 | 719 | 194 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 1.0e-100 | 166 | 721 | 566 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002319130.1 | 0 | 1 | 741 | 183 | 923 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002319130.1 | 2e-37 | 2 | 287 | 14 | 299 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002319130.1 | 5e-32 | 2 | 288 | 82 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002319130.1 | 4e-35 | 14 | 268 | 60 | 314 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325368.1 | 0 | 1 | 741 | 130 | 870 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 0 | 123 | 510 | 6 | 390 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4gz6_D | 0 | 526 | 731 | 514 | 718 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4gz6_D | 8e-20 | 21 | 167 | 6 | 152 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4gz6_D | 3e-17 | 2 | 139 | 21 | 161 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4gz6_D | 6e-16 | 55 | 199 | 6 | 150 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795247 | 459 | 283 | 741 | 0 |
| HO778725 | 446 | 296 | 741 | 0 |
| GO881553 | 328 | 360 | 687 | 0 |
| HO795247 | 52 | 233 | 284 | 1e-19 |
| GO881553 | 26 | 681 | 706 | 0.32 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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