Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G055600.1 |
Family | GH3 |
Protein Properties | Length: 628 Molecular Weight: 68341.5 Isoelectric Point: 7.3503 |
Chromosome | Chromosome/Scaffold: 13 Start: 4162753 End: 4167223 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 104 | 339 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATREPELVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIVPGLQ GDIPANSSKGIPFVAGKTKVAACAKHYLGDGGTTDGINENNTQISRHGLLSTHMPGYYNSIIKGVSTIMVSYSSWNGVKMHANRDMVTGFLKNILRFRGF VISDWEGIDRITSPPHANYSYSIQAGISAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 628 Download |
MARISPIFLM GLAVIWAALA QAEYMIYKDA TKPLNSRIKD LMSRMTLEEK IGQMTQIERN 60 VASAEVMKDY FIGSVLSGGG SVPSKQASAE TWINMVNEFQ KGALSTRLGI PMIYGIDAVH 120 GHNNVYKATI FPHNVGLGAT REPELVKRIG AATALEVRAT GIPYVFAPCI AVCRDPRWGR 180 CYESYSEDPK LVQAMTEIVP GLQGDIPANS SKGIPFVAGK TKVAACAKHY LGDGGTTDGI 240 NENNTQISRH GLLSTHMPGY YNSIIKGVST IMVSYSSWNG VKMHANRDMV TGFLKNILRF 300 RGFVISDWEG IDRITSPPHA NYSYSIQAGI SAGIDMIMVP NNYKELIDGL TSHVKNKVIP 360 MSRIDDAVKR ILRVKFVMGL FENPLADKSL VNELGSQEHR ELAREAVRKS LVLLKNGESA 420 DEPLLPLHKK ASKILVAGSH ADNLGYQCGG WTIEWQGLSG KNLTSGTTIL TAIENTVDPS 480 TEVVYKENPD ADFVKSNNFS YAIVVVGEPP YAETFGDCLN LTISEPGPST IQNVCGSVKC 540 VTVISSGRPV VIQPYLSLMD ALVAAWLPGT EGQGVADVLF GDYGFTGKLP RTWFKTVDQL 600 PMNVGDRHYD ALFPFGYGLT TDPTKTI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-38 | 29 | 620 | 661 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-47 | 411 | 622 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-75 | 4 | 620 | 689 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 5.0e-87 | 45 | 453 | 422 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 9.0e-88 | 46 | 374 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 1 | 627 | 1 | 626 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 23 | 625 | 24 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 25 | 627 | 1 | 603 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 10 | 627 | 1 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525724.1 | 0 | 1 | 625 | 1 | 624 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 23 | 625 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iex_A | 0 | 23 | 625 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iew_A | 0 | 23 | 625 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1iev_A | 0 | 23 | 625 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 1ieq_A | 0 | 23 | 625 | 1 | 603 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |