Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G066200.1 |
Family | GT14 |
Protein Properties | Length: 398 Molecular Weight: 45660.9 Isoelectric Point: 10.3241 |
Chromosome | Chromosome/Scaffold: 13 Start: 5087915 End: 5092450 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 52 | 306 | 0 |
FAYLISASRGDAKRLTRVLKALYHPGNYYLIHVDADAPEKEHREIAEFVSSDPVFGLVGNVWIVGKPNLVTYRGPTMLATTLHAMAILLRTCKWDWFINL SASDYPLVTQDDLIDAFSTLPRNLNFIQHSSRLGWKLNKRAKPIMIDPGLSSLNKSEIWWVNKQRSLPTAFKLYTGSAWTILSRSFAEYSIVGWDNLPRT LLLYYTNFVSSPEGYFQTVICNSEDYKNTTVNHDLHYITWDTPPKQHPRSLGVKD |
Full Sequence |
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Protein Sequence Length: 398 Download |
MGIKLFMISF MVTSILFSLL YIPTKLTTPN AKYNPVINLN MLKDLKPYPV TFAYLISASR 60 GDAKRLTRVL KALYHPGNYY LIHVDADAPE KEHREIAEFV SSDPVFGLVG NVWIVGKPNL 120 VTYRGPTMLA TTLHAMAILL RTCKWDWFIN LSASDYPLVT QDDLIDAFST LPRNLNFIQH 180 SSRLGWKLNK RAKPIMIDPG LSSLNKSEIW WVNKQRSLPT AFKLYTGSAW TILSRSFAEY 240 SIVGWDNLPR TLLLYYTNFV SSPEGYFQTV ICNSEDYKNT TVNHDLHYIT WDTPPKQHPR 300 SLGVKDYRRM ILSSRPFARK FKRNDPVLDK IDRELLKRYK GQFAHGGWCA RSGKRHGTCS 360 GLQNENYGVL RPGPGSRRLQ NLLTKLLSEK NFKRQCR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-78 | 52 | 311 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-180 | 52 | 397 | 348 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK32748.1 | 0 | 4 | 397 | 5 | 378 | AF361580_1 AT3g03690/T12J13_3 [Arabidopsis thaliana] |
GenBank | AAX33323.1 | 0 | 1 | 397 | 1 | 397 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
RefSeq | XP_002270685.1 | 0 | 48 | 397 | 42 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319193.1 | 0 | 1 | 397 | 1 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525678.1 | 0 | 128 | 397 | 1 | 271 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000002 | 41 | 338 | 77 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000002 | 41 | 338 | 77 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000002 | 41 | 338 | 77 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000002 | 41 | 338 | 77 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000004 | 41 | 338 | 77 | 383 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |