y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G152700.3 |
Family | AA1 |
Protein Properties | Length: 309 Molecular Weight: 33951.8 Isoelectric Point: 9.6204 |
Chromosome | Chromosome/Scaffold: 13 Start: 15615905 End: 15617472 |
Description | laccase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 291 | 0 |
MIAPGQTTDVLLTADQTPGHYYMAARAYNSANAPFDNTTTTAILEYKTAPRNAKKGKQSTPIFPRLPGFNDTNSAIAFTSRLRSPSKVKVPLQIDENLFF TVGLGLINCTNPNSPRCQGPNGTRFAASINNMSFVLPKRNSLMQAYYQGQPGIFTTDFPPVPPVKFDYTGNVSRGLWQPVKSTKLYKLKFGAKVQIVLQD TSIVTVEDHPMHLHGYHFAVIGSGFGNFNPQTDPARFNLIDPPYRNTIGTPPGGWVAIRFEADNPGIWFMHCHLDSHLNWGLGMAFLVENG |
Full Sequence |
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Protein Sequence Length: 309 Download |
MIAPGQTTDV LLTADQTPGH YYMAARAYNS ANAPFDNTTT TAILEYKTAP RNAKKGKQST 60 PIFPRLPGFN DTNSAIAFTS RLRSPSKVKV PLQIDENLFF TVGLGLINCT NPNSPRCQGP 120 NGTRFAASIN NMSFVLPKRN SLMQAYYQGQ PGIFTTDFPP VPPVKFDYTG NVSRGLWQPV 180 KSTKLYKLKF GAKVQIVLQD TSIVTVEDHP MHLHGYHFAV IGSGFGNFNP QTDPARFNLI 240 DPPYRNTIGT PPGGWVAIRF EADNPGIWFM HCHLDSHLNW GLGMAFLVEN GVGKLQSVQP 300 PPLDLPRC* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-32 | 2 | 286 | 288 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 4.0e-38 | 2 | 297 | 308 | + oxidoreductase | ||
pfam07731 | Cu-oxidase_2 | 1.0e-43 | 157 | 292 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 9.0e-45 | 2 | 298 | 304 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 3.0e-148 | 1 | 308 | 312 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180580.1 | 0 | 1 | 308 | 262 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
RefSeq | NP_196330.3 | 0 | 1 | 308 | 260 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
RefSeq | XP_002319955.1 | 0 | 1 | 308 | 269 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326089.1 | 0 | 1 | 308 | 269 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516345.1 | 0 | 1 | 308 | 269 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-28 | 2 | 298 | 256 | 531 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
PDB | 1asq_A | 2e-28 | 2 | 298 | 256 | 531 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
PDB | 1asp_B | 2e-28 | 2 | 298 | 256 | 531 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
PDB | 1asp_A | 2e-28 | 2 | 298 | 256 | 531 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
PDB | 1aso_B | 2e-28 | 2 | 298 | 256 | 531 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX274037 | 292 | 1 | 290 | 0 |
BQ966747 | 267 | 18 | 283 | 0 |
DW243722 | 270 | 1 | 268 | 0 |
DY297248 | 276 | 1 | 274 | 0 |
EG529118 | 203 | 107 | 309 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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