| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.014G083700.1 |
| Family | GH14 |
| Protein Properties | Length: 679 Molecular Weight: 75873.8 Isoelectric Point: 6.763 |
| Chromosome | Chromosome/Scaffold: 14 Start: 6591418 End: 6596839 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 244 | 661 | 0 |
| YVMLPLGAINMKCELVDPDGLLKQLKVLKSANVDGVMVYCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNVGDDVCIPLPNWVAEI GRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAIEVYFDYMRSFRAEFDEFFVDGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDKYFL KSLKKTAEVRGHPFRARGPDNAGSYNSQPHETGFFCDGGEYDGYYGRFFLNWYARILVDHGDRVLSLAKLAFEGTRIAVKLLGIHWWYKTSSHAAELTAG FYNPCNHDGYAAIVAMLKKHGAVLNFSCSELWTVDQQVDFAEAHADPEGLVWQVLNAAWDVGTPVAGENALPCYDRVTYNKILDNAKPLSDPDGRHFLSF TYLRLSPLLMERQAYMEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 679 Download |
| MDVKEEDDDN RGKLIAAQMM VGMDGGMTSN SSNNQFQHHQ QFQEHVSSPG GGTRMSRPLE 60 EKERTKLRER HRRAITARIL AGLRRHGNYN LRVRADINDV IAALAREAGW VVLPDGTTFP 120 SRSQGSRPAG GTSAAVTSSS SHLVSQPTPP GSLGGVSPGH RTSVEYNSCR MKGAFIPNPS 180 PYDLSASTQS QTPGMVGEGR EQTESDPRVG GSMDTINDKQ IVDIPPIPKL PEQDFAGSPF 240 IPVYVMLPLG AINMKCELVD PDGLLKQLKV LKSANVDGVM VYCWWGIVEA HAPQEYNWNG 300 YKRLFQMVHE LKLKLQVVMS FHECGGNVGD DVCIPLPNWV AEIGRSNPDI FFTDREGRHN 360 PECLSWGIDK ERVLRGRTAI EVYFDYMRSF RAEFDEFFVD GIISMVEVGL GPCGELRYPS 420 CPVKHGWRYP GIGEFQCYDK YFLKSLKKTA EVRGHPFRAR GPDNAGSYNS QPHETGFFCD 480 GGEYDGYYGR FFLNWYARIL VDHGDRVLSL AKLAFEGTRI AVKLLGIHWW YKTSSHAAEL 540 TAGFYNPCNH DGYAAIVAML KKHGAVLNFS CSELWTVDQQ VDFAEAHADP EGLVWQVLNA 600 AWDVGTPVAG ENALPCYDRV TYNKILDNAK PLSDPDGRHF LSFTYLRLSP LLMERQAYME 660 FERFVKRMHG NLHWSSVS* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 2.0e-142 | 241 | 668 | 436 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 5.0e-160 | 241 | 668 | 432 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-180 | 240 | 672 | 439 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 670 | 675 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 74 | 672 | 599 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC28536.1 | 0 | 3 | 671 | 24 | 678 | putative beta-amylase [Arabidopsis thaliana] |
| EMBL | CBI40368.1 | 0 | 20 | 670 | 1 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_182112.2 | 0 | 3 | 670 | 24 | 677 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 15 | 670 | 38 | 691 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 3 | 670 | 27 | 696 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdr_A | 0 | 240 | 671 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byd_A | 0 | 240 | 671 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byc_A | 0 | 240 | 671 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byb_A | 0 | 240 | 671 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1bya_A | 0 | 240 | 671 | 11 | 444 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG638376 | 267 | 249 | 515 | 0 |
| DV021150 | 292 | 326 | 617 | 0 |
| DT587209 | 255 | 257 | 511 | 0 |
| CO447286 | 288 | 318 | 605 | 0 |
| GO367915 | 286 | 252 | 537 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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