| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.014G083800.3 |
| Family | GH14 |
| Protein Properties | Length: 435 Molecular Weight: 49732.1 Isoelectric Point: 5.028 |
| Chromosome | Chromosome/Scaffold: 14 Start: 6598368 End: 6602609 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 1 | 416 | 0 |
| MLPLSVIDMNCELVDPEDLLNQLRILKSANVDGVMIDCWWGIVEAHAPQVYNWSGYRRLFQMVRDLKLKLQVVMSFHECGGNVGDDVHIPLPQWVTEIGE TNPDIYFTDREERRNTECLTWGIDKERVLKRRTAVEVYFDYMRSFRVEFDEFFQDGIISEIEIGLGPCGELRYPSYPAKHGWTYPGIGEFQCYDKYLMKS LSKAAEVRGHSFWGRGPENAGSYNSAPHEIGFFRDGGDYDSYYGRFFLNWYSQVLIDHGDRVLALANLAFEGTGISAKLSGIHWWYKTASHAAELTAGFY NSSNRDGYAPIAAMLRKHGVALNFTCFEMRTVDQFEGFPEALADPEGLVWQVLNAAWDACIPLASENALPCYDREGYNKILENAKPLHNPDGRHLSVFTY LRLSPVLMERHNFQEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 435 Download |
| MLPLSVIDMN CELVDPEDLL NQLRILKSAN VDGVMIDCWW GIVEAHAPQV YNWSGYRRLF 60 QMVRDLKLKL QVVMSFHECG GNVGDDVHIP LPQWVTEIGE TNPDIYFTDR EERRNTECLT 120 WGIDKERVLK RRTAVEVYFD YMRSFRVEFD EFFQDGIISE IEIGLGPCGE LRYPSYPAKH 180 GWTYPGIGEF QCYDKYLMKS LSKAAEVRGH SFWGRGPENA GSYNSAPHEI GFFRDGGDYD 240 SYYGRFFLNW YSQVLIDHGD RVLALANLAF EGTGISAKLS GIHWWYKTAS HAAELTAGFY 300 NSSNRDGYAP IAAMLRKHGV ALNFTCFEMR TVDQFEGFPE ALADPEGLVW QVLNAAWDAC 360 IPLASENALP CYDREGYNKI LENAKPLHNP DGRHLSVFTY LRLSPVLMER HNFQEFERFV 420 KRMHGEADSD SNAI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 1.0e-158 | 1 | 430 | 438 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-173 | 1 | 423 | 427 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 427 | 427 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 1 | 426 | 428 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 428 | 434 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40370.1 | 0 | 1 | 430 | 116 | 545 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191958.3 | 0 | 1 | 430 | 100 | 529 | BAM2 (BETA-AMYLASE 2); beta-amylase [Arabidopsis thaliana] |
| RefSeq | XP_002274612.1 | 0 | 1 | 430 | 142 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320794.1 | 0 | 1 | 425 | 13 | 437 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511858.1 | 0 | 1 | 426 | 109 | 534 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1btc_A | 0 | 1 | 432 | 13 | 446 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
| PDB | 1ukp_D | 0 | 1 | 432 | 17 | 450 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 1 | 432 | 17 | 450 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 1 | 432 | 17 | 450 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 1 | 432 | 17 | 450 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV466053 | 279 | 156 | 434 | 0 |
| DV021150 | 292 | 81 | 372 | 0 |
| GR062214 | 263 | 39 | 301 | 0 |
| CO447286 | 289 | 73 | 361 | 0 |
| GO367915 | 286 | 7 | 292 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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