CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.014G096700.2
FamilyGH18
Protein PropertiesLength: 313 Molecular Weight: 35484.6 Isoelectric Point: 6.5175
ChromosomeChromosome/Scaffold: 14 Start: 7564251 End: 7568878
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18633035e-33
  LLKKKKLRDKAIDLIISECKEMEYDGIVLESWSRWAAYGILHDPEMRNKALQFIKQLGHAMHSVSSSRNGKQYLQLVYVIGPPYSEKLQPHDFGPEDLQS
  LSDDVDGFSFMTYDFSSPHNPGPNAPLKWIRFTLQILLGNSGARALANKIFLGINFYGNDFVISEGSEGGGAITGREYLSLLEKHKPELQWEKNSGEHFF
  LYVDDEHINHAVFYPSLMSISIRLEEARLQGVGISIWEIGQ
Full Sequence
Protein Sequence     Length: 313     Download
MAKRFTNKFT ILSPVWYDLK SQGTGLVLEG RHNADMGWIS ELRRNGNALV LPRVVLEAFP    60
KELLKKKKLR DKAIDLIISE CKEMEYDGIV LESWSRWAAY GILHDPEMRN KALQFIKQLG    120
HAMHSVSSSR NGKQYLQLVY VIGPPYSEKL QPHDFGPEDL QSLSDDVDGF SFMTYDFSSP    180
HNPGPNAPLK WIRFTLQILL GNSGARALAN KIFLGINFYG NDFVISEGSE GGGAITGREY    240
LSLLEKHKPE LQWEKNSGEH FFLYVDDEHI NHAVFYPSLM SISIRLEEAR LQGVGISIWE    300
IGQGLDYFFN LL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_186.0e-1070303254+
COG3858COG38583.0e-1970312252+
smart00636Glyco_182.0e-211303334+
cd02874GH18_CFLE_spore_hydrolase7.0e-2370303246+
cd02876GH18_SI-CLP1.0e-1321312317+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.101312144516hypothetical protein [Vitis vinifera]
EMBLCBI40499.101312123435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.101312117430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.10131288399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.101312120432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A0131295393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B0131295393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.0000001172295180304A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.0000001172295180304A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CV2298902071073130
EY666243262503090
EG658151262182770
CX667344229873130
EL36022227672780
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny