CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.014G096700.3
FamilyGH18
Protein PropertiesLength: 366 Molecular Weight: 41796.8 Isoelectric Point: 9.1595
ChromosomeChromosome/Scaffold: 14 Start: 7565646 End: 7568878
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181833462.4e-25
  ELLKKKKLRDKAIDLIISECKEMEYDGIVLESWSRWAAYGILHDPEMRNKALQFIKQLGHAMHSVSSSRNGKQYLQLVYVIGPPYSEKLQPHDFGPEDLQ
  SLSDDVDGFSFMTYDFSSPHNPGPNAPLKWIRFTLQILLGNSGARALANKIFLGINFYGNDFVI
Full Sequence
Protein Sequence     Length: 366     Download
MARKRGRRVA PSSDHHETGA KTSTRPDQFS ESAASDRKLI TIFIVFFVVI PAVSVLVYRI    60
KYAPNKDSSY PQFQEDGLVK TDVDYQEILD ENSKVLKNES HRHYTYPVLA YITPWNSKGY    120
EMAKRFTNKF TILSPVWYDL KSQGTGLVLE GRHNADMGWI SELRRNGNAL VLPRVVLEAF    180
PKELLKKKKL RDKAIDLIIS ECKEMEYDGI VLESWSRWAA YGILHDPEMR NKALQFIKQL    240
GHAMHSVSSS RNGKQYLQLV YVIGPPYSEK LQPHDFGPED LQSLSDDVDG FSFMTYDFSS    300
PHNPGPNAPL KWIRFTLQIL LGNSGARALA NKIFLGINFY GNDFVISEGT SLYFSFIYLL    360
HFFFL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG3858COG38582.0e-5191358174+
pfam00704Glyco_hydro_186.0e-8191344160+
cd02874GH18_CFLE_spore_hydrolase4.0e-14108356275+
smart00636Glyco_182.0e-18108344254+
cd02876GH18_SI-CLP2.0e-98104349251+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.1013481429hypothetical protein [Vitis vinifera]
EMBLCBI40499.1013481351unnamed protein product [Vitis vinifera]
RefSeqNP_192013.1013471344glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.106135027316predicted protein [Populus trichocarpa]
RefSeqXP_002523373.1013501350chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A3.9937e-437434846310B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B3.9937e-437434846310B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
Transmembrane Domains
StartEnd
3958
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY27458234813460
DY27271431153150
FC88105630513050
FC91674630353070
DY272714363113446.1
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny