y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G114500.1 |
Family | CBM43 |
Protein Properties | Length: 135 Molecular Weight: 14532.4 Isoelectric Point: 6.4767 |
Chromosome | Chromosome/Scaffold: 14 Start: 8937194 End: 8938150 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 48 | 130 | 1.2e-29 |
WCIAKPSAYNFELLRNIDYSCGQNGVDCGQIQPGGGCFRPDTAFGHASYAMNLFFKAAGKHPWDCHFNGTGIVVTQDPSFGTC |
Full Sequence |
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Protein Sequence Length: 135 Download |
MVIAKYPSVC LPLAFALLLC LAVSTESQSY GHGGNQDQIR ADDVQSRWCI AKPSAYNFEL 60 LRNIDYSCGQ NGVDCGQIQP GGGCFRPDTA FGHASYAMNL FFKAAGKHPW DCHFNGTGIV 120 VTQDPSFGTC TYPL* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-15 | 47 | 119 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 48 | 132 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001151529.1 | 2e-30 | 37 | 132 | 354 | 449 | LOC100285163 [Zea mays] |
RefSeq | XP_002273170.1 | 1.99965e-42 | 1 | 132 | 1 | 130 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 0 | 1 | 134 | 1 | 134 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002448791.1 | 7e-30 | 45 | 132 | 376 | 463 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
RefSeq | XP_002515203.1 | 2.94273e-44 | 1 | 125 | 1 | 129 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-26 | 48 | 133 | 13 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |